Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0501 ATGGATTCAAGCTGCAGCAGTGAAGTAGAGTTTGAATGTTTGCCCTTGTTCCGAGTCTTTAAAGATGGCGTTGTGGAGAGATTACGGGGCACAGAAACCGTGCCTCCTTCTGATGTCCCCCAGAACGGCGTCGTATCCAAGGACGTCGTGATTTCGCCTGAAACAGGTCTTTCCGCCCGTCTCTTCCTCCCGATGACTGCCACCCCCGACCGCAAACTCCCAATCCTCATCTACATCCACGGCGGTGGTTTCGTCATTGAATCCCCCTTCTCCCCGCTCTATCACCCCCACGTCGTTTCTCTCGCCTCGGCGGCCAACGTCATCGCCGTCTCCGTCCACTACCGGAGGCCCCCGGAGCACCCTATTCCCATTCCCCACGATGACACGTGGGACGCTTTTCAATGGGTCGCTGCTCACTCCAGTGGCCAAGGACCCGAACCCTGGCTCAACCACCACGCCAAATTCGATAGAGTCTTCTTCGCCGGCGACAGCGCCGGAGCTAACATCGCCCACAATATGGCGATACGAGCTGGAACTACCCAACCTCCTAATGTAAAGATTTATGGGATAGTTCTGGTTCATCCCTACTTTGGCAATAATGGGCCTGATAGATTATGGAACTACCTATGCCCATCTGGGGTTCACAACTTACTGTTTGACCCGGCGGTGGACACAAAGCTATCAATCTTGGGATGCGGAAAGGTGTTGATATTTGTGGCCGGAAAAGATGTGTTGAAAGATAGGGGTTTTTGTTACTATGAAGCGGTGAAGAAGAGTGGGTGGGGTGGAGCTGTGGAGATGGTGGAGAGTGAAGGAGAAGAACACGTCTTCCATCTCTTCAACCCTGACTGTGACAAGGCTAGGGCTTTGATACAAAAGTTTGCGTCTTTCATGAACCAGGACTAG 906 0.5287 MDSSCSSEVEFECLPLFRVFKDGVVERLRGTETVPPSDVPQNGVVSKDVVISPETGLSARLFLPMTATPDRKLPILIYIHGGGFVIESPFSPLYHPHVVSLASAANVIAVSVHYRRPPEHPIPIPHDDTWDAFQWVAAHSSGQGPEPWLNHHAKFDRVFFAGDSAGANIAHNMAIRAGTTQPPNVKIYGIVLVHPYFGNNGPDRLWNYLCPSGVHNLLFDPAVDTKLSILGCGKVLIFVAGKDVLKDRGFCYYEAVKKSGWGGAVEMVESEGEEHVFHLFNPDCDKARALIQKFASFMNQD* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0501 301 SUPERFAMILY alpha/beta-Hydrolases 21 300 IPR029058 -
Vvi3g0501 301 Gene3D alpha/beta hydrolase 16 300 IPR029058 -
Vvi3g0501 301 PANTHER ARYLACETAMIDE DEACETYLASE 14 285 - -
Vvi3g0501 301 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 158 170 IPR033140 -
Vvi3g0501 301 Pfam alpha/beta hydrolase fold 76 278 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0501 Vvi-Chr3 4284150 4285055 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0501 7 301 Carbohydrate Esterase AT1G19190 47.937 3.18e-100 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0501 - - vvi:100243547 620.157