Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0500 ATGGAACACCTTCACAGCCTTCATGAGAAAGCAAAACTGGAGAAAAGCAATGGCCAACTATCCCATTTGTTCTTCCCCTTCTTTAAAATCTATCAAGATGGTCGCGTTGAAAGATTTATGCACACCGATCACGTCCCACCCTCCGACGACCCCCTTACTGGCGTTAGGTCCAAAGATGTAATCATCTCGCCCGAAACCGGCGTCTCAGCGCGTCTCTTCATCCCAAAATTACCCAACCCCAATTGCAAACTCCCCCTCCTCATCTACATCCACGGCGGAGGCTTCTCCATACAATCCGCTTTCAGTACGAGCTACAACCACTATGTCAAATCTCTGGTCGCGGAGGCCAACGTCATCGCCCTCTCCGTCGATTACCGTCTTGCGCCGGAGCACCCGATTCCGGCCTGCTACGACGATTCATGGGCTGCCGTTCAGTGGGCGGCGTCGCACGCTAATGGGGATGGACCTGACACGTGGCTGAACAACCACGCGGATTTTAGCCGGGTTTTTTTCGCCGGGGACAGTGCCGGAGGGAACATATCGAACACACTGGCATTCCGGGTCGGGTCAAGCGGACTACCGGGTGTGAAGGTTGTTGGTGTGGTGTTGGTGCACCCTTATTTTGGGGGTACGGGTGATGATCAGATGTGGCTGTACATGTGTCCGAACCATGGCGGGCTGGAGGATCCGAGGCTGAAACCGGGTGCAGAGGATCTCGCTAGATTAGGGTGTGAGAGGGTGTTGATGTTCGTGGCGGAGAAAGATCATCTGAGGCCCGTTGCTTGGGATTACTATGAGAAGTTGAAGAAAAGTGAGTGGAAAGGGACGGTGGAGATTGTTGAGAACCATGGGGAGGAGCACGTGTTCCATCTGATGAATCCCAAGTGTGAGAATGCCGCGGTTCTGATGAAAAAGATTGTTTCCTTCCTCAACCAAGAGTAG 942 0.5318 MEHLHSLHEKAKLEKSNGQLSHLFFPFFKIYQDGRVERFMHTDHVPPSDDPLTGVRSKDVIISPETGVSARLFIPKLPNPNCKLPLLIYIHGGGFSIQSAFSTSYNHYVKSLVAEANVIALSVDYRLAPEHPIPACYDDSWAAVQWAASHANGDGPDTWLNNHADFSRVFFAGDSAGGNISNTLAFRVGSSGLPGVKVVGVVLVHPYFGGTGDDQMWLYMCPNHGGLEDPRLKPGAEDLARLGCERVLMFVAEKDHLRPVAWDYYEKLKKSEWKGTVEIVENHGEEHVFHLMNPKCENAAVLMKKIVSFLNQE* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0500 313 Gene3D alpha/beta hydrolase 27 313 IPR029058 -
Vvi3g0500 313 SUPERFAMILY alpha/beta-Hydrolases 22 312 IPR029058 -
Vvi3g0500 313 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 87 103 IPR002168 GO:0016787
Vvi3g0500 313 PANTHER ARYLACETAMIDE DEACETYLASE 24 298 - -
Vvi3g0500 313 Pfam alpha/beta hydrolase fold 87 290 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0500 Vvi-Chr3 4282826 4283767 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0500 17 313 Carbohydrate Esterase AT1G19190 41.905 1.26e-86 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0500 - - vvi:100265871 629.017