Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0496 ATGGCGATTTCAGCCCCCAGGTGTTGGTTCTCTTCGGTCTTCTCCTCGTATCGCTATCCCACTCCCTTCCCATGCCAACCCCCTATCTTACGCAGATCCATTTCTACAGTGACTCCCACTGCAATCAATCACAGATCCCATTGTATGGTCGCACCGAATGCAATCAATTACAGAAAGATCTCTCCAATCCCACCTAACAAAATTAACAAACAGAAGAGTGCTGGTGGATTAAGAGAAGAAAAGAGCTACGCATTTCGCGATAGAAAGTGTTGGAAGAGGGACTTGAGAGTATCTCAATCAACAGCATTCAGATCCTTTTCCACTCAGTCGCAGGAAGACGACGAAGAGATGGAGTCCGGCAATGCCGACGTTGCCTATGACTGCCGCTTCTTCCGAGTTTACAAAGATGGTCGTGTTCACAAGTATCACCCCACTGATAAAATCCCCTCCTCCGACCACCCTCAAACTGGTGTTCGCTCTAAGGATGTCGTCGTTTCCTCCGAAACCGGGGTCTCAGTCCGGTTGTTCCTCCCCAAAATCGACGACCCAGATAAAAAGCTCCCTCTCCTGTTCTACATCCATGGTGGCGGCTTCTCCTTCTTGTCTGCCTTCTCTCCTTCCTACGACAGCTATCTCAAGTCCCTGGTGGCCGAAGCCAACGTCATTGGCGTCTCAGTCGAGTACAGACTGGCGCCAGAGAACCCGATCCCAGCTTGTTACGACGATTCGTGGGCGGCGCTCCAGTGGGTAGCGTCCCACGCTGATGGGAATGGTCCTGAGCCGTGGTTGAACAGCCACTCGGATATGAACCGGGTTTTCATCGCCGGAGACAGTGCCGGCGGGAACATTGCACACACGTTAGCGGTTCGGGTCGGTTCGATCGGGTTGCCGGGTGCAAAGGTGGTGGGAGTGGTTTTGGTTCACCCTTACTTTGGAGGGACAGTTGATGATGAGATGTGGCTGTACATGTGTCCAACCAACAGTGGGTTGGAAGACCCTAGACTGAAACCGGCTGCAGAGGATCTGGCTAGATTAAGGTGTGAGAGGGTGCTGATTTTCGTGGCGGAGAAGGATCATTTAAGAGAAATAGGATGGAGATACTATGAGGATTTGAAGAAGAGTGGATGGAAAGGGACGGTGGAGATTGTGGAGAATCACGGAGAGGAGCATGGATTCCATTTGGACAACCTCACAGGTGATCAGACCGTCGATCTTATCGCTAGGTTCGAGTCTTTCATCAATAAAGATTAG 1251 0.5116 MAISAPRCWFSSVFSSYRYPTPFPCQPPILRRSISTVTPTAINHRSHCMVAPNAINYRKISPIPPNKINKQKSAGGLREEKSYAFRDRKCWKRDLRVSQSTAFRSFSTQSQEDDEEMESGNADVAYDCRFFRVYKDGRVHKYHPTDKIPSSDHPQTGVRSKDVVVSSETGVSVRLFLPKIDDPDKKLPLLFYIHGGGFSFLSAFSPSYDSYLKSLVAEANVIGVSVEYRLAPENPIPACYDDSWAALQWVASHADGNGPEPWLNSHSDMNRVFIAGDSAGGNIAHTLAVRVGSIGLPGAKVVGVVLVHPYFGGTVDDEMWLYMCPTNSGLEDPRLKPAAEDLARLRCERVLIFVAEKDHLREIGWRYYEDLKKSGWKGTVEIVENHGEEHGFHLDNLTGDQTVDLIARFESFINKD* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0496 416 Pfam alpha/beta hydrolase fold 190 393 IPR013094 GO:0016787
Vvi3g0496 416 SUPERFAMILY alpha/beta-Hydrolases 132 415 IPR029058 -
Vvi3g0496 416 Gene3D alpha/beta hydrolase 133 416 IPR029058 -
Vvi3g0496 416 PANTHER ARYLACETAMIDE DEACETYLASE 129 395 - -
Vvi3g0496 416 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 272 284 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0496 Vvi-Chr3 4272814 4276086 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0496 121 416 Carbohydrate Esterase AT1G19190 41.587 1.76e-80 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0496 - - vvi:100250402 864.759