Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0493 ATGGATTCAAGCGACAATTCTGAACTGACCTTCAATTTCCCACCTTTTCTCCGAGTTTTCAAGGATGGTAGAGTAGAGAGGTTCCTGGGAAACGACACCGTTCCGCCTTCTCTCAATGTCGAGAACGGCGTCCACTCCAAAGACATCGTGATTGAACCAGAAACTGGCATCTCCGCCAGGCTTTACATCCCTAAAATCACTTACCCATCTCAGAAGCTACCCCTTTTAATCTACTTCCACGGCGGAGGTTTCTGCATCGAAACCTCCTCTTCTCCCACATATCACAACTATCTGGACTCCCTCGTCGCCGAAGGTAACGTCGTCGCCGTCTCCGTCAATTACAGAAGAGCCCCGGAAGACCCTCTCCCTGTTGCCTACGACGATTGCTGGACTGCATTTAAATGGGTCGTTTCCCACTCTAACAGCCAAGGCCTAGAGCCTTGGCTCAACGACCACGCCGATTTCAACCACCTCTTCCTCGCCGGCGACGATGCCGGAGCAAACCTCGCCCACAACATGGCCATACGAGCCGGGACTCGAGTCAACGAACTGGGTGGCGTCAAGGTCTCAGGAATCATTCTGGTTCATCCATATTTCTGGGGCAAAGACCCAATAGGCTCAGAGATGAACGACCTGCAGAAGAAGGCTCGCGTGGATACTCTGTGGCATTTCGTGTGTCCGACGACGAGTGGGTGCGACGACCCCCTGATAAATCCGGCGACTGATCCGCAACTGAGGAGCTTGGGCTGCCAAAAGGTTCTGATTTTTCTGGCTGAAAAGGATATGTTGAGGGATAGAGGGTGGTTTTACTATGAGACGTTGGGAAAGTCTGGGTGGGATGGTGTTGTGGACTTGACGGAGGCTGAAGCAGAGGACCATGTTTTTCATATCTTCAAACCCACCTGTGAAAAGGCCGTGGCTATGCGCAAACGAATGGCTTTGTTCTTGAATCCCCAGAATTTCAATTGA 969 0.516 MDSSDNSELTFNFPPFLRVFKDGRVERFLGNDTVPPSLNVENGVHSKDIVIEPETGISARLYIPKITYPSQKLPLLIYFHGGGFCIETSSSPTYHNYLDSLVAEGNVVAVSVNYRRAPEDPLPVAYDDCWTAFKWVVSHSNSQGLEPWLNDHADFNHLFLAGDDAGANLAHNMAIRAGTRVNELGGVKVSGIILVHPYFWGKDPIGSEMNDLQKKARVDTLWHFVCPTTSGCDDPLINPATDPQLRSLGCQKVLIFLAEKDMLRDRGWFYYETLGKSGWDGVVDLTEAEAEDHVFHIFKPTCEKAVAMRKRMALFLNPQNFN* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0493 322 SUPERFAMILY alpha/beta-Hydrolases 15 317 IPR029058 -
Vvi3g0493 322 Gene3D alpha/beta hydrolase 18 320 IPR029058 -
Vvi3g0493 322 PANTHER ARYLACETAMIDE DEACETYLASE 12 303 - -
Vvi3g0493 322 Pfam alpha/beta hydrolase fold 76 296 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0493 Vvi-Chr3 4265022 4265990 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0493 6 317 Carbohydrate Esterase AT3G48700 48.476 2.02e-107 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0493 - - vvi:100267581 676.781