Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0492 ATGGATCCAAAAGCAACTGAAATAGCTCACGATTTTCCACCGTTTCTCCGAGCATACACAGATGGGCGGGTGGAGAGGTTTTTCGGCACCGACGTGGTTCCACCGTCGGTCGATTCTGAAACTGGGGTTTCCACCAAAGACGTTGCAATTGCACCTGAAAGAGGCGTATCTGCGCGTATCTTCAAGCCAAACACCATCAATCCAGACCAGAAGCTCCCTCTGCTGATCTACTACCATGGCGGAGCCCTCTGCCTGGGCTCTCCCTACTGCACCATATACCACAACTACGTCACTTCTCTTGTCGCTGAAGCAAACATCATTGCAGTGTCTGTTGATTACAGACTGGCACCTGAACATCCCGTCCCCGTACCTCATGAAGATTCATGGGCTGCAACCCAGTGGGTGGTTTCCCATAGTCTTGGGCAAGGCCCTGAAGCCTGGCTGAATGATCATTCTGATTTCAAGCGAGTTTTTCTTGCCGGAGACAGCGGCGGAGCCAATATTGCCCACAACATGGCTGCAAGAGCTGGGGTTGAAGGATTGGGTGGTGTGAAGCTGTCAGGAATTTGTCTACTTCATCCATATTTCGGCCGGAGAGAAGCTGATTGTGATAGCCGTGGTGACGGTGACAGCCTCGTCGATAAGAAGCCAGGTGTGGATAACAGGTGGCTTTTTGTGTGTCCAACCACGAGCGGGATAAACGACCCAATAATAAACCCGGCAGCAGACCAGAATTTACGAAAATTAGGGTGCAGTAAGGTGCTGGTTTGTGTAGCAGAGAAGGATGGACTGAGAAAAAGGGGGTGGTTTTATTATGAGGTATTGGGTAAAAGTGGTTGGGGTGGGGCGTTGGAGATTGTGGAGACGGAAGGAGAAGATCATGTGTTTTTTTTGTTCAAGCCTGGTTGTGAGAAGGCTGTGGCTTTGATGAAAAGGCTGGCCTCTTTTATGAATCAAGACTAG 963 0.5005 MDPKATEIAHDFPPFLRAYTDGRVERFFGTDVVPPSVDSETGVSTKDVAIAPERGVSARIFKPNTINPDQKLPLLIYYHGGALCLGSPYCTIYHNYVTSLVAEANIIAVSVDYRLAPEHPVPVPHEDSWAATQWVVSHSLGQGPEAWLNDHSDFKRVFLAGDSGGANIAHNMAARAGVEGLGGVKLSGICLLHPYFGRREADCDSRGDGDSLVDKKPGVDNRWLFVCPTTSGINDPIINPAADQNLRKLGCSKVLVCVAEKDGLRKRGWFYYEVLGKSGWGGALEIVETEGEDHVFFLFKPGCEKAVALMKRLASFMNQD* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0492 320 Gene3D alpha/beta hydrolase 15 320 IPR029058 -
Vvi3g0492 320 Pfam alpha/beta hydrolase fold 75 297 IPR013094 GO:0016787
Vvi3g0492 320 SUPERFAMILY alpha/beta-Hydrolases 8 319 IPR029058 -
Vvi3g0492 320 PANTHER ARYLACETAMIDE DEACETYLASE 12 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0492 Vvi-Chr3 4261888 4262850 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0492 6 320 Carbohydrate Esterase AT3G48700 44.073 1.63e-92 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0492 - - vvi:100262425 669.077