Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0490 ATGGCTGCAAGAGCTGGGGTTGAAGGATTGGGTGGTGTGAAGCTGTCAGGAATTTGTCTACTTCATCCATATTTCGGCCGCAGAGAAGCTGATTGTGATAGCCGCGGTGACGGTGACAGCCTCGTCGATAAGAAGCCAGGTGTGGATAACAGGTGGCTTTTCGTGTGTCCAACCTCGAGCGGGATAAACGACCCAATAATAAACCCGGCATCAGACCAGAATTTACGAAAATTAGGGTGCAGTAAGGTGCTGGTTTGTGTAGCAGAGAAGGATGGACTGAGAAAAAGGGGGTGGTTTTATTATGAGGTATTGGGTAAAAGTGGTTGGGGTGGGGCGTTGGAGATTGTGGAGACGGAAGGAGAAGATCATGTGTTTTTTTTGTTCAAGCCTGGTTGTGAGAAGGCTGTGGCTTTGATGAAAAGGCTGGCCTCTTTTATGAATCAAGACTAG 450 0.48 MAARAGVEGLGGVKLSGICLLHPYFGRREADCDSRGDGDSLVDKKPGVDNRWLFVCPTSSGINDPIINPASDQNLRKLGCSKVLVCVAEKDGLRKRGWFYYEVLGKSGWGGALEIVETEGEDHVFFLFKPGCEKAVALMKRLASFMNQD* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0490 149 Gene3D alpha/beta hydrolase 1 149 IPR029058 -
Vvi3g0490 149 PANTHER ARYLACETAMIDE DEACETYLASE 13 133 - -
Vvi3g0490 149 SUPERFAMILY alpha/beta-Hydrolases 11 148 IPR029058 -
Vvi3g0490 149 Pfam alpha/beta hydrolase fold 12 126 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0490 Vvi-Chr3 4254017 4254466 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0490 8 149 Carbohydrate Esterase AT3G48700 43.151 2.95e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0490 - - vvi:100262425 311.227