Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0489 ATGGATTCAACTACTGCTGAAGTTGCATACAACTTTGCCCCATTTCTCCGGGTATACACAGATGGCCTTGTAGAGAGGTTGATCGGCACAGATGTAGTTCCACCGGCAATGAATTCGGAAACCGGGGTTTCCACCAAGGACGTTGTGATCGCACCTGAAACTGGCGTATCGGCACGTCTGTTCAAGCCGAACTCCGTCAACCCAGAGAAAAGGCTTCCTCTACTAGTTTACTTCCATGGCGGAGGCTTCTCCCTATGCTCCCCTTACTGCTCCATATACCATAATTACCTTACTTCTCTAGTCCTCGAAGCTGACATCATTGCAGTGTCTGTTGCCTACAGACTGGCCCCTGAAAACCCTGTCCCGGCAGCTTATGAAGATTCATGGGCTGCGCTTCAGTGGGTGGTTTCCCATTGTAATGGGCAAGGCTCCGAACCTTGGCTGAAAGACCACGCTGATTTTCAGCGAGTTTTTTTGGCGGGAGACAGTGCAGGGGGCAATATTTCACACAACTTGGCTGTACAAGCCGGGGTTGAAGGGCTGGGTGGTGTGAAGCTGCAAGGAATTTGTGTAGTTCATCCATATTTTGGGAGAAAATCAGAAGATGATGTTGGCAAGGTTGATGACAATGCCAGTGGTGGTCGACCGGACGTGAGGCCCGGTGTGGATAACTGGTGGCTTTATGCGTGTCCAACAACTAGTGGGTTCAATGACCCAAGGTACAATCCGGCGGCTGATGAGAGGTTATGGAGGCTAGGGTGCAGTAAGGTTCTGGTTTGTGTTGCAGAGAAGGATGCGCTGAGGGAAAGAGGGTGGTTTTATTATGAGACATTGGGTAAGAGTGGTTGGAGTGGAGAGGTGGAGATTATGGAGACAGAGGGGGAGGGGCATGTGTTTCATTTGTTCAAGCCTAGTTGTGGAAGGGCCGTGACCCTGATGAAAAGGATCGTCTCTTTCATCAATCAAGAATAA 972 0.5 MDSTTAEVAYNFAPFLRVYTDGLVERLIGTDVVPPAMNSETGVSTKDVVIAPETGVSARLFKPNSVNPEKRLPLLVYFHGGGFSLCSPYCSIYHNYLTSLVLEADIIAVSVAYRLAPENPVPAAYEDSWAALQWVVSHCNGQGSEPWLKDHADFQRVFLAGDSAGGNISHNLAVQAGVEGLGGVKLQGICVVHPYFGRKSEDDVGKVDDNASGGRPDVRPGVDNWWLYACPTTSGFNDPRYNPAADERLWRLGCSKVLVCVAEKDALRERGWFYYETLGKSGWSGEVEIMETEGEGHVFHLFKPSCGRAVTLMKRIVSFINQE* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0489 323 PANTHER ARYLACETAMIDE DEACETYLASE 12 305 - -
Vvi3g0489 323 Gene3D alpha/beta hydrolase 15 323 IPR029058 -
Vvi3g0489 323 Pfam alpha/beta hydrolase fold 75 300 IPR013094 GO:0016787
Vvi3g0489 323 SUPERFAMILY alpha/beta-Hydrolases 15 322 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0489 Vvi-Chr3 4250969 4251940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0489 1 321 Carbohydrate Esterase AT3G48700 45.970 1.01e-96 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0489 - - vvi:100247056 674.855