Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0487 ATGAAGGAGTACATGAGCGAATGTGAGACAATTGTAGGAATTGCAGTGATGGAGGTTGGTCATGGCGGCGTGAGGGTGAGGCCTGTGGAGGCTTCCACCACTGATGCGTCCAAGAGGAGGAGGATTGCTTCTGGGGAGCTGCGAACGTCGCCTTCGTCTAATGTTGAGCTGAGAAGCAACTGTTGCTACGTGAACTCGCCGCCGGATTCACCGTCGCCGGCCCAGTCGGAGAATTATGTTGAGCAAGTTCTCGGTGATTTGTGCGCCAGCTCATGCGCCGATCACGCTCCGGAGTCTCGTTGTTCGAGCAACGAGCCCGGTGAGGTCGTGAGGAGCAGCTTGAGATCTGCAGATCTGGAGGCCAAGGGTTTCGAAACTGAAAACTCAACGTATAGCGACGGCAGATTCAGTAGAGAGACCACTCCAGTGAGCGAGCTCTACGCTGATTCAGCTGAGATGGAGTCTACGGCGAAGACTACAGCGGCCAAACCGCGACGGAAATCTACGGCGGGAAAGATGCCGTCGACGGTTGAGATCGAAGAGTTCTTCTCCGCAGCGGAAAAGTACCAGCAACAGCGATTCGCAGAGAAGTACAACTACGATATCGTGAAGGATGCCCCCATGGAGGGCCGGTACCAGTGGGTTCGCTTGGAGCGATGA 660 0.5545 MKEYMSECETIVGIAVMEVGHGGVRVRPVEASTTDASKRRRIASGELRTSPSSNVELRSNCCYVNSPPDSPSPAQSENYVEQVLGDLCASSCADHAPESRCSSNEPGEVVRSSLRSADLEAKGFETENSTYSDGRFSRETTPVSELYADSAEMESTAKTTAAKPRRKSTAGKMPSTVEIEEFFSAAEKYQQQRFAEKYNYDIVKDAPMEGRYQWVRLER* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0487 219 PIRSF CKI_KRP_plant 1 219 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vvi3g0487 219 Gene3D p27 166 219 IPR044898 -
Vvi3g0487 219 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 218 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vvi3g0487 219 MobiDBLite consensus disorder prediction 150 173 - -
Vvi3g0487 219 Pfam Cyclin-dependent kinase inhibitor 174 217 IPR003175 GO:0004861|GO:0005634|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0487 Vvi-Chr3 4207763 4209088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0487 110 217 Core Cell Cycle Gene Families AT1G49620 46.018 2.08e-22 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0487 - - vvi:100250434 438.728