Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0459 ATGTACTCCTCTCTTTCTGCAACACACCAGAAGCTCAAGAGAGAGAGAGAGAGAAAGGGAGAGAGTTGCTGCATTTGTATGGAGATTCTTTCTATTTTCTGTTACATCTTGCTCTTTCTCTCTACTCTTCTTTCTTATCCCTTCTTATTTTTAAAGAAACAAAAGAAGAAAGTATCAAAGCAAAGAGTTTATAAGCTTCCCCCAGGCTCAATGGGGTGGCCTTATATTGGAGAGACTCTCCAACTCTACTCCCAAGACCCCACTGTCTTCTTTGATTCAAAACAGGAAAGATATGGAGAAATATTCAAAACCCACATACTTGGGTGTCCTTGTGTCATGCTGTCTAGCCCTGAGGCTGCTCGGTTTGTGCTGGTGACTCGGGCTCATTTGTTCAAGCCTACGTACCCCAAGAGTAAAGAGAAGATGATTGGCCCTTCTGCGCTGTTTTTTCACCAAGGAGACTACCATGCTCAGCTGAGGAAGCTGGTTCAGAGCTCACTATCTCCAGATTCTATTCGGAAACTAGTCCCCAGTATTGAAGCCTTGGCTATTTCTGCTTTGGAGTCATGGGCCGGCGGGCAGGTCATTAACACCTTTCATGCCATGAAGAAGTTATCTTTTGATGTTGGCATTCTTTCTGTTTTTGGTCACTTGGAGGGTAATTACAGAGACGAGCTTACCAAGAACTACTGCATAGTAGACAAAGGTTACAATTCCTTTCCCACAAATATACCAGGAACGGCATACAGCAAAGCAATCCTGGCAAGGAAAAGGCTTAATCAGATTGTGAGAGAGATCATTTGTGAGAGGAAGGAGAAGAGACTGGTGGAAAAGGATCTGTTGGGCCATCTACTGAACTTCAAAGATGAAAAGGGGCAAATTTTAACTGAGGATCAAATCGCCGACAACATCATTGGCGTACTGTTTGCTGCTCAGGACACAACGGCTAGTGTCTTAACTTGGGTCCTCAAATATCTCCATGATGATCAGAAACTTCTAGAATCTGTAAAGGCTGAGCAGAAAGCAATATTTGAATCAAACAGTGGAGGAAATCGGCCTTTGACATGGGATCAGACTAGAAACATGCCACTTACTTATAGAGTCATATTAGAGAGCTTGAGAATGGCAAGCATCATATCTTTCACCTTTAGGGAAGCCGTAGTTGATGTAGAGTACAAGGGATATCTCATTCCAAAAGGTTGGAAGGTGATGCCACTGTTCAGGAACATTCATCACAATCCGGAATTCTTCTCTGATCCTCAGAATTTCGATCCATCTAGGTTTGAGGTTGCTCCGAAACCGAATAGTTTTTTGCCATTTGGTAGTGGAGTCCATGCTTGTCCTGGAAATGAGCTTGCCAAGCTTGAGATCCTTATTTTGACTCATCATCTAGTTACCAAGTTCAGGTGGGAAGTGGTGGGATCACAAGGTGGAATTGAGTATGGACCATTCCCTGTTCCTCAGCGTGGACTCCCAGCCAGGTTTTGGAAACTGGAAAGCAAGAAGAGTGCCCCTTAA 1518 0.4374 MYSSLSATHQKLKRERERKGESCCICMEILSIFCYILLFLSTLLSYPFLFLKKQKKKVSKQRVYKLPPGSMGWPYIGETLQLYSQDPTVFFDSKQERYGEIFKTHILGCPCVMLSSPEAARFVLVTRAHLFKPTYPKSKEKMIGPSALFFHQGDYHAQLRKLVQSSLSPDSIRKLVPSIEALAISALESWAGGQVINTFHAMKKLSFDVGILSVFGHLEGNYRDELTKNYCIVDKGYNSFPTNIPGTAYSKAILARKRLNQIVREIICERKEKRLVEKDLLGHLLNFKDEKGQILTEDQIADNIIGVLFAAQDTTASVLTWVLKYLHDDQKLLESVKAEQKAIFESNSGGNRPLTWDQTRNMPLTYRVILESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNPEFFSDPQNFDPSRFEVAPKPNSFLPFGSGVHACPGNELAKLEILILTHHLVTKFRWEVVGSQGGIEYGPFPVPQRGLPARFWKLESKKSAP* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0459 505 PANTHER CYTOCHROME P450 26 62 487 - -
Vvi3g0459 505 Gene3D Cytochrome P450 55 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0459 505 Pfam Cytochrome P450 67 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0459 505 FunFam Abscisic acid 8 55 497 - -
Vvi3g0459 505 SUPERFAMILY Cytochrome P450 62 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0459 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0459 505 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0459 505 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0459 505 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0459 505 CDD CYP90-like 95 494 - -
Vvi3g0459 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Vvi3g0459 505 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0459 505 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0459 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0459 505 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0459 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0459 505 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0459 505 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0459 Vvi-Chr3 3944496 3947061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0459 29 495 Cytochrome P450 AT3G19270 71.734 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0459 K09843 - vvi:100246968 1011.91