Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0448 ATGGAACACGTCACTCCTTTCAAGCTCCTATGTCTCCTTCTTGTTCTGTCAACTGTTACAACATCTTCCATGTCAGAAGATATAAGAACTTATATAGTTCACATGGATAAATCAGCCATGCCAATTCCCTTCTCCAGTCATCATGACTGGTACTTATCAACCCTCTCATCCTTCTACTCACCAGATGGTATTCTCCCAACCCATCTCTACACCTATAACCATGTGTTGGATGGCTTCAGTGCTGTTCTGTCCCAGTCACACCTTGATCAACTGGAGAAGATGTCCGGCCACCTGGCAACATACCCAGAGACCTTTGGAACAATCCACACCACACACACCCCAAAATTTCTTGGCCTGGAGAATAATTTTGGTTCATGGCCGGGGGGCAACTTTGGTGAAGACATGGTTATTGGTATACTCGACACTGGTATCTGGCCAGAGAGTGAGAGTTTTCAGGACAAGGGAATGGCTCCTGTGCCAGATAGATGGCGAGGTGCCTGTGAATCTGGGGTGGAATTTAACTCTTCTCTTTGTAACCGAAAACTCATTGGAGCACGGTCTTTCAGTAAAGCACTGAAGCAACGAGGCTTGAACATATCAACACCTGATGATTATGATTCCCCAAGGGATTTCTATGGACATGGAACTCATACATCATCTACAGCAGCTGGGAGTCCAGTGGCAGACGCCAATTACTTTGGCTATGCCAAGGGTACAGCTACTGGCATTGCACCCAAGGCTCGGCTTGCCATGTATAAAGTGCTCTTTTACAATGATACTTACGAGTCAGCTGCCTCAGACACATTAGCCGGAATAGACCAAGCCATAGCGGATGGTGTTGATCTCATGTCACTTTCACTGGGGTTCTCTGAGACAACTTTTGAAGAAAACCCAATTGCCGTTGGAGCTTTTGCAGCCATGGAGAAAGGGATTTTTGTGTCTTGTTCAGCTGGAAACTCCGGCCCTCATGGTTACACTATATTCAATGGAGCTCCTTGGATTACAACCATTGGTGCTGGGACTATTGATTTAGATTATGCCGCTGACGTCTCACTGGGCAATGGCATATTGAACATCAGAGGAAAATCAGTTTATCCGGAAGACTTGTTAATCTCCCAGGTTCCTCTCTACTTCGGTCATGGAAATAGAAGCAAAGAACTCTGTGAGGACAATGCCATAGACCCAAAAGATGCTGCAGGCAAGATTGTGTTCTGCGACTTCTCTGAATCAGGAGGAATCCAGTCAGATGAAATGGAGAGAGTAGGAGCTGCCGGAGCCATATTCAGTACAGACTCAGGGATTTTTCTCTCGCCCAGTGATTTCTACATGCCATTTGTGGCTGTAAGCCCCAAGGATGGAGATTTGGTGAAGGACTACATAATCAAATCAGAGAATCCTGTAGTTGATATTAAGTTCCAGATAACAGTATTGGGTGCTAAACCAGCTCCTATGGTGGCTTGGTTCTCGTCACGAGGTCCTAGTCGTAGGGCTCCAATGATATTGAAGCCTGATATATTGGCTCCTGGGGTGGATATCTTAGCTGCATGGGCATCCAACAGAGGAATTACACCAATAGGGGACTATTACCTGCTCACCAATTACGCTCTCTTGTCTGGAACCTCTATGGCCTCTCCCCATGCAGTTGGGGTAGCTGCACTGCTGAAATCAGCACACCCAGATTGGAGCCCAGCTGCCGTTCGCTCGGCAATGATGACAACAGCATACCTGCTTGATAACACTCAAGGACCAATCATGGATATGACCACTGGAGTTGCAGGGACTCCTCTCGATTTTGGAGCAGGGCACATAAACCCCAACATGGCCATGGATCCTGGTCTAGTTTATGATATAGAGGCCCAAGACTATATCAATTTCCTGTGTGGATTGAACTACACCAGCAAACAGATTAAGATCATCACCAGGAGATCAAAGTTCAGCTGTGATCAAGCCAATCTAGACCTAAATTACCCTTCATTTATGGTCCTCCTCAACAATACTAACACTACAAGCTACACCTTCAAGAGGGTGTTGACAAATGTAGAGAATACCCATTCCGTTTATCATGCCAGTGTGAAGCTACCTTCAGGAATGAAAGTTTCTGTACAGCCCTCTGTAGTATCTTTCGCAGGAAAGTACAGCAAGGCTGAATTCAACATGACGGTAGAGATCAATCTGGGAGATGCCAGACCACAGAGCGATTACATTGGAAATTTCGGGTATTTAACCTGGTGGGAGGCTAATGGGACTCATGTTGTGAGCAGTCCTATTGTCTCCGCCATTGCACCTATCATCAGAACTTGA 2301 0.4611 MEHVTPFKLLCLLLVLSTVTTSSMSEDIRTYIVHMDKSAMPIPFSSHHDWYLSTLSSFYSPDGILPTHLYTYNHVLDGFSAVLSQSHLDQLEKMSGHLATYPETFGTIHTTHTPKFLGLENNFGSWPGGNFGEDMVIGILDTGIWPESESFQDKGMAPVPDRWRGACESGVEFNSSLCNRKLIGARSFSKALKQRGLNISTPDDYDSPRDFYGHGTHTSSTAAGSPVADANYFGYAKGTATGIAPKARLAMYKVLFYNDTYESAASDTLAGIDQAIADGVDLMSLSLGFSETTFEENPIAVGAFAAMEKGIFVSCSAGNSGPHGYTIFNGAPWITTIGAGTIDLDYAADVSLGNGILNIRGKSVYPEDLLISQVPLYFGHGNRSKELCEDNAIDPKDAAGKIVFCDFSESGGIQSDEMERVGAAGAIFSTDSGIFLSPSDFYMPFVAVSPKDGDLVKDYIIKSENPVVDIKFQITVLGAKPAPMVAWFSSRGPSRRAPMILKPDILAPGVDILAAWASNRGITPIGDYYLLTNYALLSGTSMASPHAVGVAALLKSAHPDWSPAAVRSAMMTTAYLLDNTQGPIMDMTTGVAGTPLDFGAGHINPNMAMDPGLVYDIEAQDYINFLCGLNYTSKQIKIITRRSKFSCDQANLDLNYPSFMVLLNNTNTTSYTFKRVLTNVENTHSVYHASVKLPSGMKVSVQPSVVSFAGKYSKAEFNMTVEINLGDARPQSDYIGNFGYLTWWEANGTHVVSSPIVSAIAPIIRT* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0448 766 SUPERFAMILY Subtilisin-like 108 613 IPR036852 GO:0004252|GO:0006508
Vvi3g0448 766 CDD Peptidases_S8_3 107 575 IPR034197 -
Vvi3g0448 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 109 IPR037045 -
Vvi3g0448 766 CDD PA_subtilisin_like 349 470 - -
Vvi3g0448 766 ProSiteProfiles Serine proteases, subtilase domain profile. 104 609 - -
Vvi3g0448 766 Pfam Fibronectin type-III domain 653 757 IPR041469 -
Vvi3g0448 766 Gene3D - 626 760 - -
Vvi3g0448 766 Gene3D Peptidase S8/S53 domain 134 622 IPR036852 GO:0004252|GO:0006508
Vvi3g0448 766 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Vvi3g0448 766 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Vvi3g0448 766 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Vvi3g0448 766 FunFam Subtilisin-like protease SBT1.9 19 109 - -
Vvi3g0448 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 757 IPR045051 -
Vvi3g0448 766 Gene3D - 343 477 - -
Vvi3g0448 766 Pfam Subtilase family 132 587 IPR000209 GO:0006508|GO:0008236
Vvi3g0448 766 FunFam Subtilisin-like protease SBT1.5 134 363 - -
Vvi3g0448 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 539 549 IPR023828 -
Vvi3g0448 766 Pfam Peptidase inhibitor I9 30 95 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0448 Vvi-Chr3 3852062 3854362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0448 12 756 Subtilisin-like Serine Gene Family AT5G67360 43.461 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0448 - - vvi:100265894 1504.19