Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0446 ATGGAATGCATTCCCTACAAGCTTCTCTTCCTCTTTCTTGCTCTCTCAACCTCCGTGGCAGAAGATCTGGGAACCTATATAATCCACATGGATAAATCAGCCATGCCAATGACCTTCTCCAGTCATCATGACTGGTACAGGTCAACGCTCTCATCCATGTCGTCCCCAGATGGTATTCTCCCAACCCATCTCTACACATATAATCACGTTTTGGATGGTTTCAGTGCAGTGCTGTCCCGTGCACACCTTGATCAATTGGAGAAGATGGCAGGTCACTTGGCAACATACCCGGATAGCTTTGGAAAACTACACACCACACACACCCCAAAGTTTCTTGGTCTGGAGAAAAAAGTTGGGTCCTGGCCGAAAGGTAAGTTCGGTGAAGACATGATTATTGGTATACTTGACAGTGGAATTTGGCCAGAGAGTGAGAGTTTCAAGGATAAGGGAATGGCTCCGGTGCCAGATAGATGGAGAGGTGCCTGTGAATCTGGGGTGGAATTTAACTCTTCTTATTGTAACCGAAAACTAATTGGAGCACGGTCTTTCAGTAAAGGGATGAAGCAACGAGGCTTGAATATATCCTTGCCTGATGATTACGATTCTCCCAGGGATTTCCTTGGACACGGGACTCACACATCGTCAACCGCAGCTGGGAGTCCAGTGAGAGATGCCAATTATTTTGGCTATGCAAAAGGAACGGCTACTGGCGTTGCACCCAAGGCTAGGCTTGCCATGTACAAAGTTTTTTTCTTCAGTGACAGCAGTGATCCGGAAGCGGCTGCCTCAGACACATTAGCCGGAATGGACCAAGCCATCGCAGACGGTGTCGATCTTATGTCTCTATCACTGGGATTCTTCGAGACAACTTTTGACGAAAACCCAATTGCAGTGGGAGCTTTTGCAGCCATGGAGAAAGGGATTTTTGTGTCTTGTTCAGCTGGGAACGCTGGTCCTCATGGTTACACTATCTTCAATGGAGCTCCTTGGATTACAACCATTGGTGCTGGGACTATTGATCGAGATTATGCCGCTGATGTGACACTAGGCAATGGCATCTTAAGAGTCAGAGGAAAATCTGTCTACCCAGAAGACGTGTTCATCTCTAACGTTCCTCTCTACTTTGGCCATGGAAATGCAAGCAAGGAAACCTGCGACTACAATGCTCTAGAGCCCCAAGAAGTTGCAGGCAAGATTGTGTTCTGTGACTTTCCAGGAGGCTATCAGCAGGATGAAATAGAGAGAGTAGGAGCTGCAGGAGCCATCTTCAGTACAGACTCACAAAATTTTCTCGGGCCGAGAGATTTTTATATACCATTCGTGGCTGTAAGCCATAAAGATGGAGATTTGGTGAAGGATTACATAATCAAATCAGAGAATCCTGTGGTTGATATCAAGTTCCAGAAAACAGTGCTGGGTGCTAAACCAGCTCCGCAGGTGGCCTGGTTTTCGTCACGGGGACCCAGTCGTAGGGCTCCAATGATATTGAAGCCTGATATATTGGCTCCTGGGGTGGATATCTTAGCTGCATGGGCACCCAACATAGGAATTACACCAATAGGGGACGATTACCTGCTCACCGATTACGCTCTCTTGTCTGGAACCTCTATGGCCTCTCCCCATGCAGTTGGGGTAGCTGCACTGCTGAAATCAGCACACCCAGATTGGAGCCCAGCTGCCATTCGCTCGGCAATGATGACAACAGCATACCTGCTTGATAACACTCAAGGACCAATCATGGATATGACCACTGGAGTTGCAGGGACTCCTCTCGATTTTGGAGCAGGGCACATAAACCCCAACATGGCCATGGATCCTGGTCTAGTTTATGATATAGAGGCCCAAGACTATATCAATTTCCTGTGTGGATTGAACTACACCAGCAAACAGATTAAGATCATCACCAGGAGATCAAAGTTCAGCTGTGATCAAGCCAATCTAGACCTAAATTACCCTTCATTTATGGTCCTCCTCAACAATACTAACACTACAAGCTACACCTTCAAGAGGGTGTTGACAAATGTAGAGAATACCCATACCGTTTATCATGCCAGTGTGAAGCAACCGTCAGGGATGAAAGTTTCTGTGCAGCCCTCTATAGTTTCATTTGCTGGTAAATACAGCAAGGCTGAATTCAACATGACGGTAGAGATCAATCTGGGAGATGCCAGACCACAGAGCGATTACATTGGAAATTTCGGGTATTTAACCTGGTGGGAGGCTAATGGGACTCATGTTGTGAGCAGTCCTATTGTCTCCGCCATTGCACCTATCATCAGAACTTGA 2286 0.4689 MECIPYKLLFLFLALSTSVAEDLGTYIIHMDKSAMPMTFSSHHDWYRSTLSSMSSPDGILPTHLYTYNHVLDGFSAVLSRAHLDQLEKMAGHLATYPDSFGKLHTTHTPKFLGLEKKVGSWPKGKFGEDMIIGILDSGIWPESESFKDKGMAPVPDRWRGACESGVEFNSSYCNRKLIGARSFSKGMKQRGLNISLPDDYDSPRDFLGHGTHTSSTAAGSPVRDANYFGYAKGTATGVAPKARLAMYKVFFFSDSSDPEAAASDTLAGMDQAIADGVDLMSLSLGFFETTFDENPIAVGAFAAMEKGIFVSCSAGNAGPHGYTIFNGAPWITTIGAGTIDRDYAADVTLGNGILRVRGKSVYPEDVFISNVPLYFGHGNASKETCDYNALEPQEVAGKIVFCDFPGGYQQDEIERVGAAGAIFSTDSQNFLGPRDFYIPFVAVSHKDGDLVKDYIIKSENPVVDIKFQKTVLGAKPAPQVAWFSSRGPSRRAPMILKPDILAPGVDILAAWAPNIGITPIGDDYLLTDYALLSGTSMASPHAVGVAALLKSAHPDWSPAAIRSAMMTTAYLLDNTQGPIMDMTTGVAGTPLDFGAGHINPNMAMDPGLVYDIEAQDYINFLCGLNYTSKQIKIITRRSKFSCDQANLDLNYPSFMVLLNNTNTTSYTFKRVLTNVENTHTVYHASVKQPSGMKVSVQPSIVSFAGKYSKAEFNMTVEINLGDARPQSDYIGNFGYLTWWEANGTHVVSSPIVSAIAPIIRT* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0446 761 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 14 104 IPR037045 -
Vvi3g0446 761 Gene3D - 621 755 - -
Vvi3g0446 761 Gene3D - 340 472 - -
Vvi3g0446 761 SUPERFAMILY Subtilisin-like 103 608 IPR036852 GO:0004252|GO:0006508
Vvi3g0446 761 CDD PA_subtilisin_like 346 465 - -
Vvi3g0446 761 CDD Peptidases_S8_3 102 570 IPR034197 -
Vvi3g0446 761 Pfam Fibronectin type-III domain 648 752 IPR041469 -
Vvi3g0446 761 Pfam Peptidase inhibitor I9 25 101 IPR010259 -
Vvi3g0446 761 ProSitePatterns Serine proteases, subtilase family, serine active site. 534 544 IPR023828 -
Vvi3g0446 761 ProSiteProfiles Serine proteases, subtilase domain profile. 111 604 - -
Vvi3g0446 761 Pfam PA domain 384 449 IPR003137 -
Vvi3g0446 761 Pfam Subtilase family 127 582 IPR000209 GO:0006508|GO:0008236
Vvi3g0446 761 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 752 IPR045051 -
Vvi3g0446 761 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Vvi3g0446 761 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
Vvi3g0446 761 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Vvi3g0446 761 Gene3D Peptidase S8/S53 domain 129 617 IPR036852 GO:0004252|GO:0006508
Vvi3g0446 761 FunFam Subtilisin-like protease SBT1.5 129 360 - -
Vvi3g0446 761 FunFam Subtilisin-like protease SBT1.9 14 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0446 Vvi-Chr3 3842924 3845209 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0446 6 751 Subtilisin-like Serine Gene Family AT5G67360 43.026 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0446 - - vvi:100255612 1531.92