Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0438 ATGGCCACGAAGCAAGAAGCTGGGAGGCACCAGGAGGTTGGCCACAAGAGCCTTTTGCAGAGTGATGCTCTTTATCAGTATATACTTGAAACCAGTGTGTACCCAAGAGAGCCCGAATCCATGAAGGAGCTCAGAGAGTTGACTGCCCAGCATCCATGGAACATCATGACTACGTCTGCTGATGAAGGGCAGTTCTTGAACATGCTTCTCAAGCTCATCAATGCCAAGAACACCATGGAGATAGGCGTCTACACTGGCTACTCTCTTCTGGCCACAGCCCTTGCTCTCCCCGATGACGGAAAGATCCTGGCTATGGACATCAACAAAGAAAATTACGAGCTGGGCCTGCCAGTAATTCAAAAGGCAGGGGTTGCCCACAAGATTGACTTCAAAGAAGGCCCTGCTTTGCCTGTTCTTGATCAGATGATCGAAGATGGGAAGTATCACGGGTCGTTCGACTTCATATTCGTGGACGCAGACAAGGACAATTATCTGAACTACCACAAGAGATTGATCGATTTGGTGAAGGTGGGGGGAATCATCGGCTACGACAACACCCTCTGGAACGGGTCGGTGGTGGCGCCACCCGATGCTCCGCTGCGGAAGTACGTGAGGTACTACAGAGACTTCGTGTTGGAGCTGAACAAGGCTCTTGCTGCTGACCCAAGAATCGAGATCTGTATGCTTCCGGTTGGTGACGGGATCACCCTTTGCCGTCGGCTAAGCTGA 729 0.5144 MATKQEAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAQHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPDDGKILAMDINKENYELGLPVIQKAGVAHKIDFKEGPALPVLDQMIEDGKYHGSFDFIFVDADKDNYLNYHKRLIDLVKVGGIIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRLS* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0438 242 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 21 240 IPR029063 -
Vvi3g0438 242 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 17 241 IPR002935 GO:0008171
Vvi3g0438 242 Gene3D Vaccinia Virus protein VP39 16 242 IPR029063 -
Vvi3g0438 242 FunFam Caffeoyl-CoA O-methyltransferase 1 10 242 - -
Vvi3g0438 242 PANTHER O-METHYLTRANSFERASE-RELATED 15 241 - -
Vvi3g0438 242 Pfam O-methyltransferase 30 241 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0438 Vvi-Chr3 3734066 3735168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0438 9 242 Monolignol Biosynthesis Gene Families AT4G34050 89.316 4.13e-165 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0438 K00588 - vvi:100233087 488.804