Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0427 ATGGCAATCCTCGCCTCCTCATCTCTCAATCGTCTAATCCGAATTCTGCTACTCCACCTACCATGGTTCCTCTGTGTAATCTGCCAGAGAACAAGACATGGAACCCCACCACCATCATTCGTATTTCCTCCTCCACCACCGCCTCCTTCGCCACCGCCTCCTTCACCACCGCCACCTTCACCATTACCTTCAGAACCACCAGTAGTACCACCAGTAGCACCACCAGTAATCTTCCCGGACCTGCGCCTCGCCACCGTTTTCCCCGTGATCCAAAAGTTCAAGGCCAGCATCACCTCCGACCCTCTTGGAATCACCTCTACATGGGTCGGTGGAGACATCTGCAAATACAAGGGCTTCTACTGCGACAACCCACCAGATAACTCCACCTCCCTGGCACTTGCCGGCATCGATTTCAATGGCTTCCAGCTGGCTGCACCTAGCCTGGATGGCTTCATTGATGCCCTTCCTGATCTAGCAATCTTCCATGCAAACACCAACTTCTTCAGCGGCAACATCACCCCCAAAATCGCCAAGCTGCCATACTTCTACGAGCTGGACCTCAGTAACAACAAGTTCTCCGGCGAGTTCCCTCCGACGGTGCTCGCCATCCCCGGCTTATCCTTCTTGGACATTCGTTATAACTCGTTTTCCGGGTCTGTCCCACCTCAGGTTTTCGTACAGAATCTCGATGTCCTCTTCATCAACAACAATAACTTCAACCAGAAAATCCCTGATGACTTCGGAAACACTCCGGCAAGGTACATAACGTTCGCAAACAACAAGTTCACCGGTCTGATACCGCGCAGCATCGGAAACTCTTCATCGACATTGACTGAAATCCTTTTTCTCAATAACTTCTTATTTGGGTGTCTTCCAATTGAAATAGGCTCTCTGAAAGAGCTGACAGTTTTCGACGTGGGCCATAACTTACTGACGGGCCTTTTGCCGTGCTCGCTGGGGTGTTTACATAACGCGGAGCAGCTCAACTTCGCCGGAAACTTTTTCTACGGTAGAGTGCCTGAAGAGTTGTGTGCATTGAAAAACCTTCAGAATTTGACTTTGTCGGATAATTATTTTACGAAAATAGGGCCAAACTGCAGAGATCTGATACCAACTGGGAAAATTGATCTGAGGAACAATTGCATTCGTAATCTTCCTGATCAGAGACCAAGATCTGATTGTCTGGCCTTCTTTTTGAAACCCAAGTTTATTTGCCCGAATATGGTCTTGTATGAAAATAATACTTGTGATGATGGTCAATTGCAATCAACTCATATGAGGTCCAGGAAACCGAATATTCCAAAGGTTACTTACTCTGCGCTTGTGAAGCATCGTTAG 1338 0.4813 MAILASSSLNRLIRILLLHLPWFLCVICQRTRHGTPPPSFVFPPPPPPPSPPPPSPPPPSPLPSEPPVVPPVAPPVIFPDLRLATVFPVIQKFKASITSDPLGITSTWVGGDICKYKGFYCDNPPDNSTSLALAGIDFNGFQLAAPSLDGFIDALPDLAIFHANTNFFSGNITPKIAKLPYFYELDLSNNKFSGEFPPTVLAIPGLSFLDIRYNSFSGSVPPQVFVQNLDVLFINNNNFNQKIPDDFGNTPARYITFANNKFTGLIPRSIGNSSSTLTEILFLNNFLFGCLPIEIGSLKELTVFDVGHNLLTGLLPCSLGCLHNAEQLNFAGNFFYGRVPEELCALKNLQNLTLSDNYFTKIGPNCRDLIPTGKIDLRNNCIRNLPDQRPRSDCLAFFLKPKFICPNMVLYENNTCDDGQLQSTHMRSRKPNIPKVTYSALVKHR* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0427 445 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 73 418 - -
Vvi3g0427 445 Gene3D Ribonuclease Inhibitor 253 400 IPR032675 -
Vvi3g0427 445 SUPERFAMILY L domain-like 94 383 - -
Vvi3g0427 445 Gene3D Ribonuclease Inhibitor 88 246 IPR032675 -
Vvi3g0427 445 MobiDBLite consensus disorder prediction 38 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0427 Vvi-Chr3 3567877 3569214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0427 72 405 Leucine-rich Repeat extension Gene Families AT3G24480 43.413 6.02e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0427 - - vvi:100246963 813.527