LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi3g0382	ATGGCGGCCTCTACTGTCCTCCTGGGTCTATTCTGTGTCTTCTTTGCCAGCACCTTCACCATCACATCTGCTGCCCCAGCCTCCACCTACACCCCACAAGATAGCTACCTCATTGACTGCGGAGGCACCACCTCCTCCCCCCTCCCTGACGGCAGAGTCTTCAAGACTGATCAGCAGGCCGCCCCATACATTTCTTCCGAAGATGATATCCAAATCTCAGTCCCATCTGCAGATGTTCCTTCGCCTATATACTTGACGGCCAGGATCTTTGTCGAGGATACTACTTACAGCTTTCGCATGTCCCGCCCAGGGTGGCATTGGGTTAGGCTTCATTTCTTTCCTATGAATAACACTGAGTTTGATCTCCAGCATGCTGTTTTCTCAGTGTCGACGGATCAGGTGGTTCTTCTCCACAGTTTCAATCTCGATAATAGTACTGAATGGGTCCTCAAGGAGTACCTTGTAAATGTTACCAATGAGCGTTTCACCCTCAAGTTCAGCCCAATGAGGAATTCTGTGGCGTTCGTCAATGCCATTGAGGTGGTTTCAGCTCCGGACATCTTGATCACGGATACCGGCTCGGCTCTTTTCCCTGTCGGGGACTTTTCAGGGCTGTCCTCCTACTCATACCAGGTAGTGTACAGGCTCAACATGGGAGGCCCCTTGATCAATTCTCAGAACGATACACTGGGGAGGACATGGGTGTCTGATCACCCATACCTCAAGTCCGATGTCTTGGCTAAGAGCGTTTCGGTTTCTCCGAGCGTCATCACCTACCCTGAGGGCGAGTCCCCGCTGATAGCACCCCAACTGGTGTATGCCTCAGCTATTCAAATGGCGGATGCCCGGGTTACCAATCCAAACTTCAATGTAACATGGAACTTTAACATTGATCCTTCATTTGGGTACCTTATCCGGATGCATTTCTGCGATATTGTGAGCAAATCTCTCAATGATCTCTACTTCAATGTGTATATCAATGGGAGGATGGCCATTTCTGGGTTGGATTTGTCCACAATCACATCTGCTTTGGCGACTCCTTATTATAAAGATATTGTTGTGAATACTTCCCTGCTGTCTGATCAGCTCACTGTTCAGATTGGTCCGATGAATCAGGACACTGGTTCAGTGAACGCCATTATTAATGGTTTGGAGATCTTGAAGATGAGCAATTCAGTGAATAGTTTGGATGGAGAGTTCGGTGTTGATGGGTCTAAGGCGGAGACTTCAAGTAACCGCAACGCGGTGGCTGCCGTCGGGTTTGCCATGATGTTTGGAGCCTTTGTGGGGCTTGGTGCCATGGTGATTAAGTGGCAGAGAAGGCCTCATGACTGGGAAAAGAGGAACAGCTTTTCTTCATGGTTGCTCCCGCTTCATGCCGGAGACACCAGCTTCATGACAAGCAAGAACTCATTGGGGTCTCATAAGAGCGGCTTCTACTCATCTACTCTAGGCCTAGGTCGATACTTCTCATTCACTGAATTACAGGAAGCAACTAAGAACTTTGATTCAAATGCAATTATAGGAGTTGGTGGGTTCGGCAATGTCTACCTGGGAGAGATCGATGATGGGACCAAAGTTGCTGTCAAGAGAGGAAACCCGCAATCAGAGCAAGGTATCACAGAGTTCCAGACAGAAATTCAGATGTTGTCAAAGCTCAGACACAGGCACTTGGTGTCACTGATTGGGTACTGTGATGAAAACTCAGAGATGATACTGGTGTATGAGTACATGTCCAATGGACCTTTCAGGGATCATTTGTATGGGAAGAACTTGGCTTCATTGTCCTGGAAGCAGAGGCTGGAGATCTGTATCGGGGCGGCTCGCGGCCTTCATTACCTTCACACTGGTGCAGCACAAGGGATCATCCATAGAGACGTTAAGACAACAAACATTTTGCTTGATGACAACTTCATTGCTAAGGTTGCTGATTTTGGGCTGTCCAAAAATGCACCCACCATGGAGCAGGGCCATGTGAGCACAGCAGTGAAGGGGAGCTTCGGGTATCTGGACCCAGAGTATTTCAGGAGGCAGCAGTTGACAGACAAGTCTGATGTGTATTCATTTGGGGTAGTGCTGCTAGAGGCATTGTGTGCAAGGCCTGCCATCAACCCACAACTCCCAAGAGAGCAAGTGAACCTGGCTGAATGGGCAATGCAGTGGAAGAGGAAGGGCTTGCTGGACAAGATCATCGACCCCCTTCTGGCAGGCACCATCAATCCTGAATCAATGAAAAAGTTTGCTGAGGCCGCAGAGAAGTGCCTGGCTGATCATGGTGTTGACAGACCTTCCATGGGAGATGTCCTGTGGAACTTGGAGTATGCTTTGCAGCTACAAGAGGCTTCACTACAAGGAAAGGCCGAGGAAGAAAGCAAACTGTCTGCCGCCCCTGCTCCTGCAGTAGTTCCTCCTACTTCCACAGCCGATAATCGCCCACTGTCCTCACCAGAAGAGAGTAACAATCCAGCTGAAGTTCAGGTCATTGATGAGCACTCAGGAACTGCAATGTTTGCCCAATTTTCTGGGCTCAGTGGTAGATAA	2541	0.4911	MAASTVLLGLFCVFFASTFTITSAAPASTYTPQDSYLIDCGGTTSSPLPDGRVFKTDQQAAPYISSEDDIQISVPSADVPSPIYLTARIFVEDTTYSFRMSRPGWHWVRLHFFPMNNTEFDLQHAVFSVSTDQVVLLHSFNLDNSTEWVLKEYLVNVTNERFTLKFSPMRNSVAFVNAIEVVSAPDILITDTGSALFPVGDFSGLSSYSYQVVYRLNMGGPLINSQNDTLGRTWVSDHPYLKSDVLAKSVSVSPSVITYPEGESPLIAPQLVYASAIQMADARVTNPNFNVTWNFNIDPSFGYLIRMHFCDIVSKSLNDLYFNVYINGRMAISGLDLSTITSALATPYYKDIVVNTSLLSDQLTVQIGPMNQDTGSVNAIINGLEILKMSNSVNSLDGEFGVDGSKAETSSNRNAVAAVGFAMMFGAFVGLGAMVIKWQRRPHDWEKRNSFSSWLLPLHAGDTSFMTSKNSLGSHKSGFYSSTLGLGRYFSFTELQEATKNFDSNAIIGVGGFGNVYLGEIDDGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEYMSNGPFRDHLYGKNLASLSWKQRLEICIGAARGLHYLHTGAAQGIIHRDVKTTNILLDDNFIAKVADFGLSKNAPTMEQGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMQWKRKGLLDKIIDPLLAGTINPESMKKFAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEASLQGKAEEESKLSAAPAPAVVPPTSTADNRPLSSPEESNNPAEVQVIDEHSGTAMFAQFSGLSGR*	847

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi3g0382	846	MobiDBLite	consensus disorder prediction	807	827	-	-
	Vvi3g0382	846	Pfam	Protein tyrosine and serine/threonine kinase	506	701	IPR001245	GO:0004672\|GO:0006468
	Vvi3g0382	846	ProSiteProfiles	Protein kinase domain profile.	502	775	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vvi3g0382	846	Gene3D	Phosphorylase Kinase; domain 1	477	577	-	-
	Vvi3g0382	846	Gene3D	-	208	391	-	-
	Vvi3g0382	846	Gene3D	-	33	185	-	-
	Vvi3g0382	846	FunFam	receptor-like protein kinase FERONIA	466	577	-	-
	Vvi3g0382	846	CDD	STKc_IRAK	508	773	-	-
	Vvi3g0382	846	SMART	serkin_6	502	775	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vvi3g0382	846	FunFam	Receptor-like protein kinase FERONIA	578	792	-	-
	Vvi3g0382	846	FunFam	Putative receptor-like protein kinase	35	185	-	-
	Vvi3g0382	846	PANTHER	OS07G0166700 PROTEIN	488	779	IPR045272	GO:0004714\|GO:0006468
	Vvi3g0382	846	ProSitePatterns	Protein kinases ATP-binding region signature.	508	530	IPR017441	GO:0005524
	Vvi3g0382	846	SUPERFAMILY	Protein kinase-like (PK-like)	478	773	IPR011009	-
	Vvi3g0382	846	MobiDBLite	consensus disorder prediction	787	831	-	-
	Vvi3g0382	846	Pfam	Malectin-like domain	38	388	IPR024788	-
	Vvi3g0382	846	Gene3D	Transferase(Phosphotransferase) domain 1	578	798	-	-
	Vvi3g0382	846	FunFam	Receptor-like protein kinase FERONIA	209	391	-	-
	Vvi3g0382	846	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	622	634	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi3g0382	Vvi-Chr3	3154088	3156628	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi3g0382	30	846	Receptor kinase-like Gene Family	AT4G39110	71.018	0.0	1228

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Vvi3g0382		Malectin_like	1.2e-39	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi3g0382	-		-	vvi:100265813	1677.14