Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0382 ATGGCGGCCTCTACTGTCCTCCTGGGTCTATTCTGTGTCTTCTTTGCCAGCACCTTCACCATCACATCTGCTGCCCCAGCCTCCACCTACACCCCACAAGATAGCTACCTCATTGACTGCGGAGGCACCACCTCCTCCCCCCTCCCTGACGGCAGAGTCTTCAAGACTGATCAGCAGGCCGCCCCATACATTTCTTCCGAAGATGATATCCAAATCTCAGTCCCATCTGCAGATGTTCCTTCGCCTATATACTTGACGGCCAGGATCTTTGTCGAGGATACTACTTACAGCTTTCGCATGTCCCGCCCAGGGTGGCATTGGGTTAGGCTTCATTTCTTTCCTATGAATAACACTGAGTTTGATCTCCAGCATGCTGTTTTCTCAGTGTCGACGGATCAGGTGGTTCTTCTCCACAGTTTCAATCTCGATAATAGTACTGAATGGGTCCTCAAGGAGTACCTTGTAAATGTTACCAATGAGCGTTTCACCCTCAAGTTCAGCCCAATGAGGAATTCTGTGGCGTTCGTCAATGCCATTGAGGTGGTTTCAGCTCCGGACATCTTGATCACGGATACCGGCTCGGCTCTTTTCCCTGTCGGGGACTTTTCAGGGCTGTCCTCCTACTCATACCAGGTAGTGTACAGGCTCAACATGGGAGGCCCCTTGATCAATTCTCAGAACGATACACTGGGGAGGACATGGGTGTCTGATCACCCATACCTCAAGTCCGATGTCTTGGCTAAGAGCGTTTCGGTTTCTCCGAGCGTCATCACCTACCCTGAGGGCGAGTCCCCGCTGATAGCACCCCAACTGGTGTATGCCTCAGCTATTCAAATGGCGGATGCCCGGGTTACCAATCCAAACTTCAATGTAACATGGAACTTTAACATTGATCCTTCATTTGGGTACCTTATCCGGATGCATTTCTGCGATATTGTGAGCAAATCTCTCAATGATCTCTACTTCAATGTGTATATCAATGGGAGGATGGCCATTTCTGGGTTGGATTTGTCCACAATCACATCTGCTTTGGCGACTCCTTATTATAAAGATATTGTTGTGAATACTTCCCTGCTGTCTGATCAGCTCACTGTTCAGATTGGTCCGATGAATCAGGACACTGGTTCAGTGAACGCCATTATTAATGGTTTGGAGATCTTGAAGATGAGCAATTCAGTGAATAGTTTGGATGGAGAGTTCGGTGTTGATGGGTCTAAGGCGGAGACTTCAAGTAACCGCAACGCGGTGGCTGCCGTCGGGTTTGCCATGATGTTTGGAGCCTTTGTGGGGCTTGGTGCCATGGTGATTAAGTGGCAGAGAAGGCCTCATGACTGGGAAAAGAGGAACAGCTTTTCTTCATGGTTGCTCCCGCTTCATGCCGGAGACACCAGCTTCATGACAAGCAAGAACTCATTGGGGTCTCATAAGAGCGGCTTCTACTCATCTACTCTAGGCCTAGGTCGATACTTCTCATTCACTGAATTACAGGAAGCAACTAAGAACTTTGATTCAAATGCAATTATAGGAGTTGGTGGGTTCGGCAATGTCTACCTGGGAGAGATCGATGATGGGACCAAAGTTGCTGTCAAGAGAGGAAACCCGCAATCAGAGCAAGGTATCACAGAGTTCCAGACAGAAATTCAGATGTTGTCAAAGCTCAGACACAGGCACTTGGTGTCACTGATTGGGTACTGTGATGAAAACTCAGAGATGATACTGGTGTATGAGTACATGTCCAATGGACCTTTCAGGGATCATTTGTATGGGAAGAACTTGGCTTCATTGTCCTGGAAGCAGAGGCTGGAGATCTGTATCGGGGCGGCTCGCGGCCTTCATTACCTTCACACTGGTGCAGCACAAGGGATCATCCATAGAGACGTTAAGACAACAAACATTTTGCTTGATGACAACTTCATTGCTAAGGTTGCTGATTTTGGGCTGTCCAAAAATGCACCCACCATGGAGCAGGGCCATGTGAGCACAGCAGTGAAGGGGAGCTTCGGGTATCTGGACCCAGAGTATTTCAGGAGGCAGCAGTTGACAGACAAGTCTGATGTGTATTCATTTGGGGTAGTGCTGCTAGAGGCATTGTGTGCAAGGCCTGCCATCAACCCACAACTCCCAAGAGAGCAAGTGAACCTGGCTGAATGGGCAATGCAGTGGAAGAGGAAGGGCTTGCTGGACAAGATCATCGACCCCCTTCTGGCAGGCACCATCAATCCTGAATCAATGAAAAAGTTTGCTGAGGCCGCAGAGAAGTGCCTGGCTGATCATGGTGTTGACAGACCTTCCATGGGAGATGTCCTGTGGAACTTGGAGTATGCTTTGCAGCTACAAGAGGCTTCACTACAAGGAAAGGCCGAGGAAGAAAGCAAACTGTCTGCCGCCCCTGCTCCTGCAGTAGTTCCTCCTACTTCCACAGCCGATAATCGCCCACTGTCCTCACCAGAAGAGAGTAACAATCCAGCTGAAGTTCAGGTCATTGATGAGCACTCAGGAACTGCAATGTTTGCCCAATTTTCTGGGCTCAGTGGTAGATAA 2541 0.4911 MAASTVLLGLFCVFFASTFTITSAAPASTYTPQDSYLIDCGGTTSSPLPDGRVFKTDQQAAPYISSEDDIQISVPSADVPSPIYLTARIFVEDTTYSFRMSRPGWHWVRLHFFPMNNTEFDLQHAVFSVSTDQVVLLHSFNLDNSTEWVLKEYLVNVTNERFTLKFSPMRNSVAFVNAIEVVSAPDILITDTGSALFPVGDFSGLSSYSYQVVYRLNMGGPLINSQNDTLGRTWVSDHPYLKSDVLAKSVSVSPSVITYPEGESPLIAPQLVYASAIQMADARVTNPNFNVTWNFNIDPSFGYLIRMHFCDIVSKSLNDLYFNVYINGRMAISGLDLSTITSALATPYYKDIVVNTSLLSDQLTVQIGPMNQDTGSVNAIINGLEILKMSNSVNSLDGEFGVDGSKAETSSNRNAVAAVGFAMMFGAFVGLGAMVIKWQRRPHDWEKRNSFSSWLLPLHAGDTSFMTSKNSLGSHKSGFYSSTLGLGRYFSFTELQEATKNFDSNAIIGVGGFGNVYLGEIDDGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEYMSNGPFRDHLYGKNLASLSWKQRLEICIGAARGLHYLHTGAAQGIIHRDVKTTNILLDDNFIAKVADFGLSKNAPTMEQGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMQWKRKGLLDKIIDPLLAGTINPESMKKFAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEASLQGKAEEESKLSAAPAPAVVPPTSTADNRPLSSPEESNNPAEVQVIDEHSGTAMFAQFSGLSGR* 847
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0382 846 MobiDBLite consensus disorder prediction 807 827 - -
Vvi3g0382 846 Pfam Protein tyrosine and serine/threonine kinase 506 701 IPR001245 GO:0004672|GO:0006468
Vvi3g0382 846 ProSiteProfiles Protein kinase domain profile. 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi3g0382 846 Gene3D Phosphorylase Kinase; domain 1 477 577 - -
Vvi3g0382 846 Gene3D - 208 391 - -
Vvi3g0382 846 Gene3D - 33 185 - -
Vvi3g0382 846 FunFam receptor-like protein kinase FERONIA 466 577 - -
Vvi3g0382 846 CDD STKc_IRAK 508 773 - -
Vvi3g0382 846 SMART serkin_6 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi3g0382 846 FunFam Receptor-like protein kinase FERONIA 578 792 - -
Vvi3g0382 846 FunFam Putative receptor-like protein kinase 35 185 - -
Vvi3g0382 846 PANTHER OS07G0166700 PROTEIN 488 779 IPR045272 GO:0004714|GO:0006468
Vvi3g0382 846 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Vvi3g0382 846 SUPERFAMILY Protein kinase-like (PK-like) 478 773 IPR011009 -
Vvi3g0382 846 MobiDBLite consensus disorder prediction 787 831 - -
Vvi3g0382 846 Pfam Malectin-like domain 38 388 IPR024788 -
Vvi3g0382 846 Gene3D Transferase(Phosphotransferase) domain 1 578 798 - -
Vvi3g0382 846 FunFam Receptor-like protein kinase FERONIA 209 391 - -
Vvi3g0382 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi3g0382 Vvi-Chr3 3154088 3156628 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0382 30 846 Receptor kinase-like Gene Family AT4G39110 71.018 0.0 1228
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vvi3g0382 Malectin_like 1.2e-39 CL0202
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0382 - - vvi:100265813 1677.14