Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi3g0382 | ATGGCGGCCTCTACTGTCCTCCTGGGTCTATTCTGTGTCTTCTTTGCCAGCACCTTCACCATCACATCTGCTGCCCCAGCCTCCACCTACACCCCACAAGATAGCTACCTCATTGACTGCGGAGGCACCACCTCCTCCCCCCTCCCTGACGGCAGAGTCTTCAAGACTGATCAGCAGGCCGCCCCATACATTTCTTCCGAAGATGATATCCAAATCTCAGTCCCATCTGCAGATGTTCCTTCGCCTATATACTTGACGGCCAGGATCTTTGTCGAGGATACTACTTACAGCTTTCGCATGTCCCGCCCAGGGTGGCATTGGGTTAGGCTTCATTTCTTTCCTATGAATAACACTGAGTTTGATCTCCAGCATGCTGTTTTCTCAGTGTCGACGGATCAGGTGGTTCTTCTCCACAGTTTCAATCTCGATAATAGTACTGAATGGGTCCTCAAGGAGTACCTTGTAAATGTTACCAATGAGCGTTTCACCCTCAAGTTCAGCCCAATGAGGAATTCTGTGGCGTTCGTCAATGCCATTGAGGTGGTTTCAGCTCCGGACATCTTGATCACGGATACCGGCTCGGCTCTTTTCCCTGTCGGGGACTTTTCAGGGCTGTCCTCCTACTCATACCAGGTAGTGTACAGGCTCAACATGGGAGGCCCCTTGATCAATTCTCAGAACGATACACTGGGGAGGACATGGGTGTCTGATCACCCATACCTCAAGTCCGATGTCTTGGCTAAGAGCGTTTCGGTTTCTCCGAGCGTCATCACCTACCCTGAGGGCGAGTCCCCGCTGATAGCACCCCAACTGGTGTATGCCTCAGCTATTCAAATGGCGGATGCCCGGGTTACCAATCCAAACTTCAATGTAACATGGAACTTTAACATTGATCCTTCATTTGGGTACCTTATCCGGATGCATTTCTGCGATATTGTGAGCAAATCTCTCAATGATCTCTACTTCAATGTGTATATCAATGGGAGGATGGCCATTTCTGGGTTGGATTTGTCCACAATCACATCTGCTTTGGCGACTCCTTATTATAAAGATATTGTTGTGAATACTTCCCTGCTGTCTGATCAGCTCACTGTTCAGATTGGTCCGATGAATCAGGACACTGGTTCAGTGAACGCCATTATTAATGGTTTGGAGATCTTGAAGATGAGCAATTCAGTGAATAGTTTGGATGGAGAGTTCGGTGTTGATGGGTCTAAGGCGGAGACTTCAAGTAACCGCAACGCGGTGGCTGCCGTCGGGTTTGCCATGATGTTTGGAGCCTTTGTGGGGCTTGGTGCCATGGTGATTAAGTGGCAGAGAAGGCCTCATGACTGGGAAAAGAGGAACAGCTTTTCTTCATGGTTGCTCCCGCTTCATGCCGGAGACACCAGCTTCATGACAAGCAAGAACTCATTGGGGTCTCATAAGAGCGGCTTCTACTCATCTACTCTAGGCCTAGGTCGATACTTCTCATTCACTGAATTACAGGAAGCAACTAAGAACTTTGATTCAAATGCAATTATAGGAGTTGGTGGGTTCGGCAATGTCTACCTGGGAGAGATCGATGATGGGACCAAAGTTGCTGTCAAGAGAGGAAACCCGCAATCAGAGCAAGGTATCACAGAGTTCCAGACAGAAATTCAGATGTTGTCAAAGCTCAGACACAGGCACTTGGTGTCACTGATTGGGTACTGTGATGAAAACTCAGAGATGATACTGGTGTATGAGTACATGTCCAATGGACCTTTCAGGGATCATTTGTATGGGAAGAACTTGGCTTCATTGTCCTGGAAGCAGAGGCTGGAGATCTGTATCGGGGCGGCTCGCGGCCTTCATTACCTTCACACTGGTGCAGCACAAGGGATCATCCATAGAGACGTTAAGACAACAAACATTTTGCTTGATGACAACTTCATTGCTAAGGTTGCTGATTTTGGGCTGTCCAAAAATGCACCCACCATGGAGCAGGGCCATGTGAGCACAGCAGTGAAGGGGAGCTTCGGGTATCTGGACCCAGAGTATTTCAGGAGGCAGCAGTTGACAGACAAGTCTGATGTGTATTCATTTGGGGTAGTGCTGCTAGAGGCATTGTGTGCAAGGCCTGCCATCAACCCACAACTCCCAAGAGAGCAAGTGAACCTGGCTGAATGGGCAATGCAGTGGAAGAGGAAGGGCTTGCTGGACAAGATCATCGACCCCCTTCTGGCAGGCACCATCAATCCTGAATCAATGAAAAAGTTTGCTGAGGCCGCAGAGAAGTGCCTGGCTGATCATGGTGTTGACAGACCTTCCATGGGAGATGTCCTGTGGAACTTGGAGTATGCTTTGCAGCTACAAGAGGCTTCACTACAAGGAAAGGCCGAGGAAGAAAGCAAACTGTCTGCCGCCCCTGCTCCTGCAGTAGTTCCTCCTACTTCCACAGCCGATAATCGCCCACTGTCCTCACCAGAAGAGAGTAACAATCCAGCTGAAGTTCAGGTCATTGATGAGCACTCAGGAACTGCAATGTTTGCCCAATTTTCTGGGCTCAGTGGTAGATAA | 2541 | 0.4911 | MAASTVLLGLFCVFFASTFTITSAAPASTYTPQDSYLIDCGGTTSSPLPDGRVFKTDQQAAPYISSEDDIQISVPSADVPSPIYLTARIFVEDTTYSFRMSRPGWHWVRLHFFPMNNTEFDLQHAVFSVSTDQVVLLHSFNLDNSTEWVLKEYLVNVTNERFTLKFSPMRNSVAFVNAIEVVSAPDILITDTGSALFPVGDFSGLSSYSYQVVYRLNMGGPLINSQNDTLGRTWVSDHPYLKSDVLAKSVSVSPSVITYPEGESPLIAPQLVYASAIQMADARVTNPNFNVTWNFNIDPSFGYLIRMHFCDIVSKSLNDLYFNVYINGRMAISGLDLSTITSALATPYYKDIVVNTSLLSDQLTVQIGPMNQDTGSVNAIINGLEILKMSNSVNSLDGEFGVDGSKAETSSNRNAVAAVGFAMMFGAFVGLGAMVIKWQRRPHDWEKRNSFSSWLLPLHAGDTSFMTSKNSLGSHKSGFYSSTLGLGRYFSFTELQEATKNFDSNAIIGVGGFGNVYLGEIDDGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEYMSNGPFRDHLYGKNLASLSWKQRLEICIGAARGLHYLHTGAAQGIIHRDVKTTNILLDDNFIAKVADFGLSKNAPTMEQGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMQWKRKGLLDKIIDPLLAGTINPESMKKFAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEASLQGKAEEESKLSAAPAPAVVPPTSTADNRPLSSPEESNNPAEVQVIDEHSGTAMFAQFSGLSGR* | 847 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi3g0382 | 846 | MobiDBLite | consensus disorder prediction | 807 | 827 | - | - | |
Vvi3g0382 | 846 | Pfam | Protein tyrosine and serine/threonine kinase | 506 | 701 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi3g0382 | 846 | ProSiteProfiles | Protein kinase domain profile. | 502 | 775 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi3g0382 | 846 | Gene3D | Phosphorylase Kinase; domain 1 | 477 | 577 | - | - | |
Vvi3g0382 | 846 | Gene3D | - | 208 | 391 | - | - | |
Vvi3g0382 | 846 | Gene3D | - | 33 | 185 | - | - | |
Vvi3g0382 | 846 | FunFam | receptor-like protein kinase FERONIA | 466 | 577 | - | - | |
Vvi3g0382 | 846 | CDD | STKc_IRAK | 508 | 773 | - | - | |
Vvi3g0382 | 846 | SMART | serkin_6 | 502 | 775 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi3g0382 | 846 | FunFam | Receptor-like protein kinase FERONIA | 578 | 792 | - | - | |
Vvi3g0382 | 846 | FunFam | Putative receptor-like protein kinase | 35 | 185 | - | - | |
Vvi3g0382 | 846 | PANTHER | OS07G0166700 PROTEIN | 488 | 779 | IPR045272 | GO:0004714|GO:0006468 | |
Vvi3g0382 | 846 | ProSitePatterns | Protein kinases ATP-binding region signature. | 508 | 530 | IPR017441 | GO:0005524 | |
Vvi3g0382 | 846 | SUPERFAMILY | Protein kinase-like (PK-like) | 478 | 773 | IPR011009 | - | |
Vvi3g0382 | 846 | MobiDBLite | consensus disorder prediction | 787 | 831 | - | - | |
Vvi3g0382 | 846 | Pfam | Malectin-like domain | 38 | 388 | IPR024788 | - | |
Vvi3g0382 | 846 | Gene3D | Transferase(Phosphotransferase) domain 1 | 578 | 798 | - | - | |
Vvi3g0382 | 846 | FunFam | Receptor-like protein kinase FERONIA | 209 | 391 | - | - | |
Vvi3g0382 | 846 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 622 | 634 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi3g0382 | Vvi-Chr3 | 3154088 | 3156628 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi3g0382 | 30 | 846 | Receptor kinase-like Gene Family | AT4G39110 | 71.018 | 0.0 | 1228 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Vvi3g0382 | Malectin_like | 1.2e-39 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi3g0382 | - | - | vvi:100265813 | 1677.14 |