Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0367 ATGATAACTATGAAACCAAAAATGGGTAGAAACTGGGTCATCTTCCTCCTCCTTGTGACCTCTGGGGTGGTCATGGCTTCTGCAGCTGAAGTACTGGTGACCCAATTCTCTTATAATGAATTCAATGAGGAGAGGGACACTGGTAGCTTTAAACTTTTAGGGCAGGCCTCCATTGATGGTGGAGCTCTTCAGTTAACTCCCGACACCTCCAATGATGACTACATCTTTATCAACAAAAGCGGCCGCATTTTCTGGCCTAAACCTTTTAAGCTGTGGGATTCCAATGGCGATGAAGAAGACGGCAACCTCGCCTCGTTCGTCTCCTTTTTCGTCATTAACATCTATAGGCAACCAAGCTGGAATGCGGGTGAGGGCTTTGCTTTTGTGATTGCACCCAATCTTACCATACCTGAAGCAAGCCACGGGCAATGGCTTGGCCTCACCAACGCTACCACCGACGGTGACCGCACCAACCAGATCGTGGCGGTGGAGTTCGACACGGAAAAGCAAGACTTTGATCCGGACGACAACCACATCGGCCTTAATATCAACTCGGTTCGCTCATACACTACTGTCTCTCTCACCCCTTCTGGGATAGAAATTTCTCCTGAAGAAGGGACCAACTACAGCGTCTGGGTCCAATACGATGGCCAAGCTAAGGTGATGGAGGTGTACATGGGGAAAGAAGGGGATCCCAAGCCGAGCTCACCGCTTCTTAGAGATACTATAGACCTCAAACATTACGTGAAGCAGGAATCTTACTTCGGGTTCGCTGCTTCCACAGGCTACCCAGCAATCCAGTTGAACTGCGTTTTGAAATGGAAGTTAGACATGGAGATTTTACCCGGAGACAAAGGGTTCATGTGGTGGTTGTTGTCCATACCTGCGGTGATATTGATCTTGGTAGTGGTAGGTGGGATTGTGTATCTGAATTACAAGAAAAGAAGAGAGGGAGGGAATAGAGAGGAAGGCAATGTGCTGGGGGACTTGAGGAGGTTGACAGGGATGCCCAGAGAGTTCAGGTATAAGGATTTGAAGAAGGCGACCAAAAACTTCGATGAGAGTACGAAACTGGGGCAGGGTGGATTTGGAGTTGTTTACAAAGGCGTTTTGCAAGAGGATGGTGATGATTCCACCACTGAGGTTGCTGTAAAGCAATTCTCTAGAGACGACATCAAAGGCAAAGGTGATTTCATGGCGGAGCTCACCATCATTCACCGCCTTCGCCACAAACATCTTGTCCGGTTAGTCGGGTGGTGCTACGAGAAAGGGAAGCTCCTCCTAGTCTACGACTTCATGCCAAATGGGAGCCTAGACAAGCACCTATTTGGGGATCACTATGATAATACGCTGAATTGGGAACGCCGATACAACATAGTTACGGGCGTAGGGTCAGCACTTCTTTACCTGCATAATGAGTTCGACCAGAAGGTGGTGCACCGTGACCTCAAAGGCAGCAACATCATGCTTGACTCCACCTTCAATGCCCGGTTGGGTGACTTCGGCCTTGCCCGAGCCTTGGACAATGACAGAAGCTCCTATGCTGAGTTAGAACTAGGTGGGTTCCCAGGAACCATGGGCTATGTTGCTCCAGAGTGCTTCCACACACAGAAGGCCACGGTCGAATCTGATGTGTATGCTTTCGGAGCAGTGGTGCTTGAGGTGGTGTGTGGAAGAAGTCCTGGAAGTGAAATCTCTTACAACCAGCGTCTATATAGCTTGGTAGATTGGGTTTGGATGTTACATCGAGAAGGGCGGATTGTAGAAGCTGTGGATGAGAGGCTTGGGAACAATTATGTGGATGATGAAGCAAGAAGACTTCTACTTCTAGGGTTGGCCTGTTCACATCCCTCAGCCAGTGAACGGCCAGCAACACTGGCCATTGTCCAGATTCTATCAGGTTCTGTCTCAGCCCCCCATGTACCTCCATTCAAGCCAGCCTTCACATGGGCCTCCATGGCTAGCCTCACCACCCCCACAACCACCAGCATCATACTTCCTAGCATAGCATCCTTGTCTCCTTAA 2025 0.4943 MITMKPKMGRNWVIFLLLVTSGVVMASAAEVLVTQFSYNEFNEERDTGSFKLLGQASIDGGALQLTPDTSNDDYIFINKSGRIFWPKPFKLWDSNGDEEDGNLASFVSFFVINIYRQPSWNAGEGFAFVIAPNLTIPEASHGQWLGLTNATTDGDRTNQIVAVEFDTEKQDFDPDDNHIGLNINSVRSYTTVSLTPSGIEISPEEGTNYSVWVQYDGQAKVMEVYMGKEGDPKPSSPLLRDTIDLKHYVKQESYFGFAASTGYPAIQLNCVLKWKLDMEILPGDKGFMWWLLSIPAVILILVVVGGIVYLNYKKRREGGNREEGNVLGDLRRLTGMPREFRYKDLKKATKNFDESTKLGQGGFGVVYKGVLQEDGDDSTTEVAVKQFSRDDIKGKGDFMAELTIIHRLRHKHLVRLVGWCYEKGKLLLVYDFMPNGSLDKHLFGDHYDNTLNWERRYNIVTGVGSALLYLHNEFDQKVVHRDLKGSNIMLDSTFNARLGDFGLARALDNDRSSYAELELGGFPGTMGYVAPECFHTQKATVESDVYAFGAVVLEVVCGRSPGSEISYNQRLYSLVDWVWMLHREGRIVEAVDERLGNNYVDDEARRLLLLGLACSHPSASERPATLAIVQILSGSVSAPHVPPFKPAFTWASMASLTTPTTTSIILPSIASLSP* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0367 674 Pfam Protein tyrosine and serine/threonine kinase 355 575 IPR001245 GO:0004672|GO:0006468
Vvi3g0367 674 Gene3D Phosphorylase Kinase; domain 1 337 432 - -
Vvi3g0367 674 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 288 IPR013320 -
Vvi3g0367 674 ProSitePatterns Legume lectins beta-chain signature. 161 167 IPR019825 -
Vvi3g0367 674 SUPERFAMILY Protein kinase-like (PK-like) 334 632 IPR011009 -
Vvi3g0367 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Vvi3g0367 674 PANTHER - 67 639 - -
Vvi3g0367 674 SMART serkin_6 352 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi3g0367 674 Gene3D Transferase(Phosphotransferase) domain 1 433 639 - -
Vvi3g0367 674 FunFam probable L-type lectin-domain containing receptor kinase S.5 337 432 - -
Vvi3g0367 674 FunFam Probable L-type lectin-domain containing receptor kinase S.5 33 285 - -
Vvi3g0367 674 ProSitePatterns Protein kinases ATP-binding region signature. 358 385 IPR017441 GO:0005524
Vvi3g0367 674 CDD lectin_legume_LecRK_Arcelin_ConA 34 274 IPR001220 GO:0030246
Vvi3g0367 674 FunFam probable L-type lectin-domain containing receptor kinase S.5 433 637 - -
Vvi3g0367 674 Gene3D - 33 285 - -
Vvi3g0367 674 ProSiteProfiles Protein kinase domain profile. 352 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi3g0367 674 Pfam Legume lectin domain 34 279 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0367 Vvi-Chr3 3025509 3027713 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0367 13 656 Receptor kinase-like Gene Family AT5G55830 36.179 1.66e-125 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vvi3g0367 PK_Tyr_Ser-Thr 8.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0367 - - vvi:100257156 1307.74