Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0345 ATGATGAGGGTTGAAGGAAGGGCGTATCAGGAGTTGTCACCTAGTTACTATGGGATTTGTACAGTTGGAGGAATGCTCAGTGCCGGAACGATCCATCTCGCTATCACTCCTCTGGACGTCTTGAAAGTGAATATGCAGGTGAACCCAATCAAGTATAATAGTATTACATCAGGTTTGAATACCCTCTGGAAAGAACAAGGTCCTTCTGCCCTATGGAGGGGTTGGTCCGGCAAGTTATTTGGATATGGTGTTCAAGGGGGCTGCAAATTTGGTCTCTATGAATACTTCAAGAGGATTTACTCAGATGTGTTGGTAGATCAAAACAGGAGTGTCATATTCTTTGTCAGCAGTGCTTCTGCTCAAGTATTTGCTGATGTAGCCCTCTGCCCTTTTGAGGCTGTCAAAGTCCGAGTTCAAACACAGCCCCATTTCGCAAAGGGCTTGGCTGATGGGTTCCCAAAATTATATGCAACTGAAGGGCTCTCTGGCTTTTACAAAGGACTTTTTCCGCTTTGGGGGCGTAATCTTCCATTCTCTATGACGATGTTTTCAACATTTGAGCATTCAATAGACTTCATATATGACAACATTATCCAAAAAAAGAAAGAAGATTGCTCAGTGGCCCAGCAGCTTGGCGTGACATGTTTGGCGGGCTATGCAGCTGGAGCTTTTGGTACCTTAATCTCTAACCCTGCGGACAACATTGTTTCCTCCCTTTATAACAAAAACGCAGAAAATGTGTTGCAGGCTGCGAAGAATATTGGGTTTGCTAATTTGTTTACTAGGAGTCTTCCTCTTCGAATTACATTTGTGGGGCCTGTTGTGACATTGCAGTGGTTCTTTTACGACACCATTAAAGTTCTAAGTGGATTCCCTACAAGTGGAGGGCCTGTCAGGCATATCGAAGAAGCTGATAGATCCGCTTAA 927 0.4412 MMRVEGRAYQELSPSYYGICTVGGMLSAGTIHLAITPLDVLKVNMQVNPIKYNSITSGLNTLWKEQGPSALWRGWSGKLFGYGVQGGCKFGLYEYFKRIYSDVLVDQNRSVIFFVSSASAQVFADVALCPFEAVKVRVQTQPHFAKGLADGFPKLYATEGLSGFYKGLFPLWGRNLPFSMTMFSTFEHSIDFIYDNIIQKKKEDCSVAQQLGVTCLAGYAAGAFGTLISNPADNIVSSLYNKNAENVLQAAKNIGFANLFTRSLPLRITFVGPVVTLQWFFYDTIKVLSGFPTSGGPVRHIEEADRSA* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0345 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 192 IPR018108 -
Vvi3g0345 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 99 IPR018108 -
Vvi3g0345 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 288 IPR018108 -
Vvi3g0345 308 SUPERFAMILY Mitochondrial carrier 18 284 IPR023395 -
Vvi3g0345 308 FunFam Mitochondrial phosphate carrier protein 1, mitochondrial 18 289 - -
Vvi3g0345 308 Pfam Mitochondrial carrier protein 114 195 IPR018108 -
Vvi3g0345 308 Pfam Mitochondrial carrier protein 22 101 IPR018108 -
Vvi3g0345 308 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 7 297 IPR044677 GO:0005315|GO:1990547
Vvi3g0345 308 Gene3D Mitochondrial carrier domain 19 290 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0345 Vvi-Chr3 2885284 2887669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0345 1 307 Chloroplast and Mitochondria Gene Families AT2G17270 73.377 1.57e-173 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0345 K15102 - vvi:100258841 627.476