Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0255 ATGATTCAGTCATCTTTCCATCTCAATTTTAACATCATCTCGCTCACCAATCATAAGGTCCTACATGATTGGGGAGATGAAAAGTGCATCAAGATCCTAGAAAAATGCAGAGAAGCCATTCCGGAGGACAAAGGGAAGGTGGTAATTGTAGAAGCCGTGATTGAAGATGGTGATCCTCAAGGTGATGATCAGAAGCTCAAGGATGTGAAGTTGATGGTAGACATGGTTATGATGGCACATACTACTACAGGCAAAGAAAGGACCTTCAAGGAATGGGACTACGTCCTTCTCAATGCTGGTTTTAGTCGATATACCATAAAACCTATTCGCAATATTGTGCAGTCTATCATTGAAGCATACCCTTAG 366 0.4153 MIQSSFHLNFNIISLTNHKVLHDWGDEKCIKILEKCREAIPEDKGKVVIVEAVIEDGDPQGDDQKLKDVKLMVDMVMMAHTTTGKERTFKEWDYVLLNAGFSRYTIKPIRNIVQSIIEAYP* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0255 121 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 20 120 IPR029063 -
Vvi3g0255 121 PANTHER O-METHYLTRANSFERASE 19 103 IPR016461 GO:0008168
Vvi3g0255 121 Gene3D Vaccinia Virus protein VP39 8 121 IPR029063 -
Vvi3g0255 121 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 121 IPR016461 GO:0008168
Vvi3g0255 121 Pfam O-methyltransferase domain 18 102 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0255 Vvi-Chr3 2202897 2204632 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0255 20 106 Monolignol Biosynthesis Gene Families AT1G77520 42.529 8.72e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0255 K22588 - vvi:100245447 206.838