Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi3g0248 | ATGCCAAAGAGCACTCATCCAAATCTTGCAGAGTTGCTCGAGAGGTGCTGGCAACAAGATCCAACATTAAGACCCGACTTCTCTGAAATTATAGAGATTCTTCAGCAAATAGCTAAAGAGGTTGGAGATGAAGAAGATCGGCCCAAGGTGCAATCTTCTAGCGGATTCCTATCTGTTCTCAGACGCGCCATCACTGACCATAAAGAAAATCATGATTATTCTCGTGATGTGAAAACATAG | 240 | 0.4292 | MPKSTHPNLAELLERCWQQDPTLRPDFSEIIEILQQIAKEVGDEEDRPKVQSSSGFLSVLRRAITDHKENHDYSRDVKT* | 80 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi3g0248 | 79 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 44 | IPR011009 | - | |
Vvi3g0248 | 79 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 78 | - | - | |
Vvi3g0248 | 79 | Pfam | Protein tyrosine and serine/threonine kinase | 2 | 34 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi3g0248 | Vvi-Chr3 | 2122136 | 2122801 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi3g0248 | 1 | 63 | MAP Kinase Kinase Kinase | AT4G35780 | 57.143 | 4.33e-19 | 77.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-4 | Vvi3g0248 | PK_Tyr_Ser-Thr | 2.9e-05 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi3g0248 | - | - | vri:117909332 | 128.642 |