Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0174 ATGGCGCCTCCTTTCTTACTCGTCTTCTTTTTTTTCTTCTTCTCTGGGGTTCCGCTGAATGCGGCATCGTTTTCGCATGATCAGGCGGTGAAGACCTATATCTTTCGGGTGGATGGCGATTCTAAGCCGTCCATTTTTCCTACACACTACCACTGGTATAGCTCGGAGTTTGCTGACCCGGTTCAAATCCTCCATGTATACGACGTCGTTTTTCATGGCTTCTCTGCTACTCTCACCCCAGACAGAGCCGCTTCGATTCTTCAGAACCCCTCGGTTCTGGCGGTGTTCGAGGATCGCCGCCGTGAGCTGCACACCACTCGGTCGCCGCAGTTTCTTGGCCTGAGGAACCAGCGGGGGCTTTGGTCGGAGTCCGACTATGGCTCTGATGTTATTGTGGGAGTGTTTGATACTGGAGTGTGGCCGGAGCGGCGGAGCTTCTCGGATCTGAATCTCGGGCCGGTGCCGGCGAAGTGGAAGGGGATATGCGAGACTGGAGTGAGGTTCGCGAGGACGAATTGTAACCGGAAGCTCGTCGGAGCTAGGTTTTTCGCTAAAGGGCATGAGGCGGCGGCGAAAGGCGCCGGTCCAGGATTTGGAGGGATCAATGAGACTGTGGAATTCAGGTCGCCGAGAGATGCTGATGGGCACGGAACTCACACTGCGTCGACTGCTGCTGGGAGATATGCTTTCAAGGCGAGCATGTCTGGCTATGCCGCCGGGATTGCGAAAGGCGTTGCTCCGAAAGCTCGACTGGCTGTTTACAAAGTGTGCTGGAAAAACTCCGGTTGTTTCGATTCCGACATCCTGGCGGCATTTGATGCTGCTGTTGCTGATGGTGTCGACGTGATTTCGATCTCGATCGGAGGTGGCGACGGAATTTCTTCTCCGTATTACCTTGATCCGATTGCAATTGGTTCTTTCGGAGCAGTATCGAAGGGCGTTTTCGTTTCAGCATCTGCTGGAAACGATGGACCAAACGGAATGTCAGTTACAAACCTTGCGCCTTGGCAAACGTCGGTCGGAGCTGGCACCATTGATCGTAATTTCCCAGCGGATGTGGTTCTTGGTAACGGAAAGAGACTCTCAGGAGTGTCGCTTTACTCTGGAGAGCCACTGAAAGGGAAACTGTATTCTCTGGTTTACCCTGGAAAATCTGGGATTCTCGCTGCCTCACTGTGTATGGAGAATTCGCTTGATCCAACAATGGTGAAAGGAAAGATTGTGGTTTGCGATCGTGGAAGCAGTCCTAGGGTTGCTAAAGGTCTGGTAGTGAGGAAAGCTGGCGGCATCGGAATGATTCTCGCTAATGGGATCTCCAATGGCGAAGGCTTAGTCGGCGATGCTCATCTCATTCCAGCTTGCGCTGTTGGCTCCGACGAGGGCGACGCCTTGAAGTCCTACATTTCATCGACCTCAAAACCTACCGCAACCATCGATTTCAAAGGAACTGTGATAGGAATCAAGCCAGCACCGGTAGTGGCCTCCTTCTCCGGCCGAGGACCAAACGGACTCAACCCCGAAATTCTCAAGCCTGATCTCATAGCACCTGGTGTGAACATCCTCGCCGCGTGGACCGACGCCGTCGGCCCCACCGGACTCGACTCAGATACTCGGAAAACAGAATTCAACATTCTCTCTGGCACATCGATGGCTTGCCCTCACGTCAGCGGCGCAGCGGCGCTCCTGAAATCTGCACATCCCGATTGGAGTCCAGCCGCGATAAGGTCCGCGATGATGACCACTGCTAGCATCACCGACAACCGTCTCCAGCCCATGATTGACGAAGCCACCGGAAAACCATCCACGCCATACGATTTCGGCGCCGGGAACCTCAACCTCGACCAAGCAATGGACCCAGGCCTAGTCTACGATATCACAAACGCCGATTACGTCAACTTCCTATGTTCAATTGGTTACAACCCCAAGATCATTCAGGTGATTACTCGATCACCGGAAACCTGTCCGTCGAAGAAACCCCTGCCAGAGAATCTCAACTACCCATCAATATCAGCATTGTTCCCCGCCACATCCGTGGGAGTTTCAACCAAATCCTTTATCCGAACGTTGACAAATGTGGGGCCGCCGAATTCAGTATACAGAGTGAAAATCGAAACTCCGCCAAAGGGAGTGACGGTGGCTGTGAAGCCAGCGAAGCTGGTGTTCTCGGAAAAGATGAAGAAACAGAGCTTTGTAGTGACCGTATCCGCCGACAGCCGAAAAATAGAAATGGGCGAATCGGGTGCGGTATTCGGATCACTGTCGTGGTCTGATGGAAAGCACGTGGTTCGGAGCCCCATAGTGGTAACTCAAATAGAGCCGTTGTAA 2325 0.5316 MAPPFLLVFFFFFFSGVPLNAASFSHDQAVKTYIFRVDGDSKPSIFPTHYHWYSSEFADPVQILHVYDVVFHGFSATLTPDRAASILQNPSVLAVFEDRRRELHTTRSPQFLGLRNQRGLWSESDYGSDVIVGVFDTGVWPERRSFSDLNLGPVPAKWKGICETGVRFARTNCNRKLVGARFFAKGHEAAAKGAGPGFGGINETVEFRSPRDADGHGTHTASTAAGRYAFKASMSGYAAGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDAAVADGVDVISISIGGGDGISSPYYLDPIAIGSFGAVSKGVFVSASAGNDGPNGMSVTNLAPWQTSVGAGTIDRNFPADVVLGNGKRLSGVSLYSGEPLKGKLYSLVYPGKSGILAASLCMENSLDPTMVKGKIVVCDRGSSPRVAKGLVVRKAGGIGMILANGISNGEGLVGDAHLIPACAVGSDEGDALKSYISSTSKPTATIDFKGTVIGIKPAPVVASFSGRGPNGLNPEILKPDLIAPGVNILAAWTDAVGPTGLDSDTRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASITDNRLQPMIDEATGKPSTPYDFGAGNLNLDQAMDPGLVYDITNADYVNFLCSIGYNPKIIQVITRSPETCPSKKPLPENLNYPSISALFPATSVGVSTKSFIRTLTNVGPPNSVYRVKIETPPKGVTVAVKPAKLVFSEKMKKQSFVVTVSADSRKIEMGESGAVFGSLSWSDGKHVVRSPIVVTQIEPL* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0174 774 Pfam Subtilase family 127 596 IPR000209 GO:0006508|GO:0008236
Vvi3g0174 774 ProSiteProfiles Serine proteases, subtilase domain profile. 100 617 - -
Vvi3g0174 774 FunFam subtilisin-like protease SBT1.5 346 485 - -
Vvi3g0174 774 Gene3D - 346 485 - -
Vvi3g0174 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Vvi3g0174 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 104 IPR037045 -
Vvi3g0174 774 SUPERFAMILY Subtilisin-like 103 621 IPR036852 GO:0004252|GO:0006508
Vvi3g0174 774 Pfam Fibronectin type-III domain 663 768 IPR041469 -
Vvi3g0174 774 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Vvi3g0174 774 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Vvi3g0174 774 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Vvi3g0174 774 FunFam Subtilisin-like protease SBT1.5 129 390 - -
Vvi3g0174 774 CDD Peptidases_S8_3 102 583 IPR034197 -
Vvi3g0174 774 Gene3D - 634 771 - -
Vvi3g0174 774 Gene3D Peptidase S8/S53 domain 129 630 IPR036852 GO:0004252|GO:0006508
Vvi3g0174 774 CDD PA_subtilisin_like 352 478 - -
Vvi3g0174 774 SUPERFAMILY PA domain 400 473 IPR046450 -
Vvi3g0174 774 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 58 768 IPR045051 -
Vvi3g0174 774 Pfam PA domain 378 464 IPR003137 -
Vvi3g0174 774 FunFam Subtilisin-like protease SBT1.5 634 771 - -
Vvi3g0174 774 Pfam Peptidase inhibitor I9 33 104 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0174 Vvi-Chr3 1535585 1537909 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0174 6 774 Subtilisin-like Serine Gene Family AT4G34980 73.411 0.0 1187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0174 - - vvi:100854771 1501.88