Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0147 ATGGCGGCAACAGTGTCTCCGTGGGGGAAGGCCGGCGCGTGGGCCCTAGATTCAGAGGAGCATGAAGACGAGCTTCTACAACAGCAACGAGATGATAAAGTTAATGGAGAATTTTCCGGCGGTGAGGGACGGCAGGCGCCGGAGGCTTCGGCAGATTTTCCGACTTTGGCAACGGCGGCCGCTACGAAATCCAAGAAGAAGAAAGGTCAGACCTTGTCGCTGTCGGAGTTTTCGGCCTTCGGCGCTGGGAAATCGGCTCAGCCAAGCCAAACCAAGGGGCTGACTCATGAGGATTTGATGATGCTGCCTACTGGGCCGCGGCAGCGGAGCGCGGAGGAGCTGGACCGTGGCCGACTCGGCGGAGGGTTCAGGTCGTACGGTTCGAATGGTTCGTATGAAGGCGGGCGGAGTCGGTATGGGGGCGGCGAGGATTCGGCGAACCCTAGATGGGGTCCTAGGGGTTCGGAGGAGAGGAGACAGGGAGGCTTTGGGAGGGATTCGAGCAGGGAATTGGCGCCTTCTAGGGCTGATGAGATCGACGATTGGGGTGCGGCGAAGAAATCGACGGTGGGCAATGGGTTTGAGAGGAGGGATAGAGGAGGGTTCTTTGATTCGCAGTCTCGAGCAGATGAATCGGCCAGTTGGGTGTCGAATAAAAGCTTCACTCCGTCGGAGGGACGAAGATTTGGCGGCGGCGGCGGCTTTGAGAGTCTCAGAGAGAGAAGAGGGGGTTTTGATTCTGCCTCGGATGGTGGTGGTGGTGCTGATTCCGAGTCCTGGGGACGGAAAAAGGAAGAGGGAAGTGGGAATGCTAATGGCAGTGCGGGATCGAGGCCAAAGCTTATTTTGCAGCCTCGGACAGTGCCGGTGAACGATGGACAACAACCAGGGTCTGGGTCGGTTGCGAAGCCCAAGGGTCCAAATCCTTTTGGAGAGGCCCGGCCGAGGGAGGAGGTATTGGCTGAGAAAGGGCAGGATTGGAAGGAAATTGAGGAGAAGCTGGAGTCTGTGAAGCTTAAGGACGTGGGTTCGCCAGGCGTGGGGCAAACAGATGGGCCATCGTTTGGGAAGAGGAGTTTTGGAAGTGGTAATGCGAGGGCGAGTTTGCCTGAAAGTAGGAGTGAGAAGAGTTGGAGGAAGCCAGAATCTGAAGATGTGAGAGCTGCAAAAACTGAGGATGAACATGAAGAGAAAACTCAAGATTGA 1206 0.5672 MAATVSPWGKAGAWALDSEEHEDELLQQQRDDKVNGEFSGGEGRQAPEASADFPTLATAAATKSKKKKGQTLSLSEFSAFGAGKSAQPSQTKGLTHEDLMMLPTGPRQRSAEELDRGRLGGGFRSYGSNGSYEGGRSRYGGGEDSANPRWGPRGSEERRQGGFGRDSSRELAPSRADEIDDWGAAKKSTVGNGFERRDRGGFFDSQSRADESASWVSNKSFTPSEGRRFGGGGGFESLRERRGGFDSASDGGGGADSESWGRKKEEGSGNANGSAGSRPKLILQPRTVPVNDGQQPGSGSVAKPKGPNPFGEARPREEVLAEKGQDWKEIEEKLESVKLKDVGSPGVGQTDGPSFGKRSFGSGNARASLPESRSEKSWRKPESEDVRAAKTEDEHEEKTQD* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0147 401 MobiDBLite consensus disorder prediction 1 53 - -
Vvi3g0147 401 MobiDBLite consensus disorder prediction 77 401 - -
Vvi3g0147 401 MobiDBLite consensus disorder prediction 372 401 - -
Vvi3g0147 401 MobiDBLite consensus disorder prediction 310 339 - -
Vvi3g0147 401 MobiDBLite consensus disorder prediction 207 224 - -
Vvi3g0147 401 Pfam Plant specific eukaryotic initiation factor 4B 7 356 IPR010433 GO:0003743
Vvi3g0147 401 MobiDBLite consensus disorder prediction 191 205 - -
Vvi3g0147 401 MobiDBLite consensus disorder prediction 77 94 - -
Vvi3g0147 401 MobiDBLite consensus disorder prediction 150 184 - -
Vvi3g0147 401 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 395 IPR010433 GO:0003743
Vvi3g0147 401 MobiDBLite consensus disorder prediction 15 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0147 Vvi-Chr3 1357958 1360211 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0147 48 380 Eukaryotic Initiation Factors Gene Family AT4G38710 52.909 3.86e-84 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0147 - - vvi:100262348 726.857