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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vvi3g0134
ATGGATCATCAGAACCCCGAAGCTTTCTGCCAGTCCACTCACTACCCACCTCCTGACCCGCGTGTCTCCTCCACTCGCTCACACCCAGACTCCAGCAAGAGGTCTGAGGGGGAATTCAAGGATTTTGTTACTGCAAGGAAGGTTCAGAAGGCTGATAGGGAGAAATTGAGGAGGGATCGGTTGAATGAGCAGTTTATAGAGTTGGGAAATGCCTTAGATCCTGATAGGCCCAAAAATGATAAAGCAACCATTCTTTCTGATACAATTCAATTGCTCAAGGACTTGACAGCCCAAGTTGAGAAACTGAAAGCTGAGAATGCATCACTAAATGAAGAATCCCGTGAGTTAACTCAGGAGAAGAATGATCTCAGAGAAGAGAAGGCATCCCTCAAATCGGCTACTGAGAACCTTAATGTTCAGTATCAACAGAGACTCAGAGCTATGTTCCCATGGTCTGCCATTGATCCCTCAGTTGTTGTAAGTCCACCTTCTTACCCGTTTCCAGTGCCAGTCCCAGTGCCTATCCCTACAGGTTCAATTCCCATGCATCCATCTATGCAGCCATATCCTTTCTTTGGAAGTCAGAACACTGGGATCATTCCTAACCCCTGTTCGACTTTTGTTCCATACTTTACTCCAAATACCCTGATTGAACCACAGTCAACACAACATGTATCTCCACCTATGCAACCAGGCAGTACGTCCAACATTTCAAGCAAACAGGATTCCAAGAATGAGTCACCAGGGGAGAGCAAGAGTGAAAAAGGTGAAGATTCTACTGATGTTGCAACAGACCTGCAGCTCAAGACACCTGGATCTAAATCTGATCAGGAAGTATCATCAGGGCAACAGCAACACAAACCCAAGAGATCTCTGAGTAAGGAAAAGAACAGTACAGAAGGGAGCTCTTCAAGTAGGTGTTCTTCGTCTCCTAGTGTACAGGATAGCTCCTCAAATAGTGTAGTTGGTGGCAGAAAGGCTGACGACTGA
990
0.4596
MDHQNPEAFCQSTHYPPPDPRVSSTRSHPDSSKRSEGEFKDFVTARKVQKADREKLRRDRLNEQFIELGNALDPDRPKNDKATILSDTIQLLKDLTAQVEKLKAENASLNEESRELTQEKNDLREEKASLKSATENLNVQYQQRLRAMFPWSAIDPSVVVSPPSYPFPVPVPVPIPTGSIPMHPSMQPYPFFGSQNTGIIPNPCSTFVPYFTPNTLIEPQSTQHVSPPMQPGSTSNISSKQDSKNESPGESKSEKGEDSTDVATDLQLKTPGSKSDQEVSSGQQQHKPKRSLSKEKNSTEGSSSSRCSSSPSVQDSSSNSVVGGRKADD*
330
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vvi3g0134
329
Pfam
Helix-loop-helix DNA-binding domain
46
95
IPR011598
GO:0046983
Vvi3g0134
329
MobiDBLite
consensus disorder prediction
263
287
-
-
Vvi3g0134
329
MobiDBLite
consensus disorder prediction
218
244
-
-
Vvi3g0134
329
MobiDBLite
consensus disorder prediction
26
55
-
-
Vvi3g0134
329
Gene3D
-
44
124
IPR036638
GO:0046983
Vvi3g0134
329
Coils
Coil
85
140
-
-
Vvi3g0134
329
MobiDBLite
consensus disorder prediction
106
127
-
-
Vvi3g0134
329
MobiDBLite
consensus disorder prediction
218
329
-
-
Vvi3g0134
329
PANTHER
TRANSCRIPTION FACTOR BHLH121
20
328
IPR044579
GO:0003700|GO:0006879
Vvi3g0134
329
SUPERFAMILY
HLH, helix-loop-helix DNA-binding domain
45
115
IPR036638
GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vvi3g0134
Vvi-Chr3
1252448
1255340
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vvi3g0134
35
329
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT3G19860
56.757
2.24e-90
271
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
bHLH
Vvi3g0134
HLH
3e-08
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vvi3g0134
-
-
vvi:100257183
573.933
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