Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0119 ATGGAAAGGGCTGTAATCTCCTTTGTCGTAAACAGGATTGGTGACCAACTCATGGAAGAAGCAATTTTCTTGAAGGAGGTGCGCCCACGAATTGAGAGGCTGCATAGAGATCTGAAGGCGATCAACTGCTTCTTAGAAGCAGCAGATGCGAAGCAAGAGGAAGACCCAAGAGTGCGTAACTGGGTTTCGGACATCCGAGATGTTGCTTATGATGCTGAGGACGTTGTCGACATGTTCATCCTTAAGGCTGAGGCCCTGAGGAGAAAAATCTTTGTCAAGCGCATTTTCCAAAAGCCCGTGTATCTGCATAATCTTGGCAAGAAAATTGATGAGATCCAAACCAACCTCCATGACATCTCAAGGAGGCGAGAAATCCTGGGAATAAAAAATATTGGAGTAGGAACAAGTACTTCAAGTCAGATGCTGCAGAATCTAAGACGGACCACTCCTCGCGCCGAAAAACATGTCATTGTGGGCCTGAATGAAGAAGCAAATAAGCTAGTGGAGCAGCTGACCACGGGGGACCCAAGGCGCCGCGTGGTTTCTATAGTAGGAATGGGCGGCATCGGCAAAACTACTCTTGCCAAGAAAGTCTATAATCATAGCAGAGTTATGGATCATTTTCAGTCTTGTCGTGTCTGGGTTTATGTATCTGAAGATTGTAGACCCAGGAATATTTTTCAGCAAATTCTAAACCAACTTCTTCATAACCCAAAGCAGATAGAGAAATTGCAGGAGAACGAGTTGGAGGATTTACTTCACGAGCACCTAGAGGAGAAAAGATTTTTGGTAGTTTTGGATGACATATGGAAAAGTGACGATTGGAAGTGTCTTGCAAGGGTGTTCCCAGAGGAGAGTAATGGCAGCAGATTACTTCTTACAACTCGAAATAAGGATGTTGCTTTGCAAGCAGATGCTCGAAGTGTTCCACATGACATGCAGCTTCTCTCGGAAGAAGAGGGTTGGAAGTTGTTTTGTAGAACTGCAATCCCTGACAATGTTACTGACGGTTGTCCTCCAGAGTTGAAGGAATTTGGGGAAAAAATGGTGAAGAAATGTGCTGGTTTACCATTGGCTATTGTTGTATTGGGAGGCTTGTTGTCTTCCAAAAAGCAGTTGCCGACTATGTGGGAAGAAGTGTTCAACAAACTCCGGGTGCACTTTGCCGCACGCAATGGAGTAGATGCAATATTGAGCTTAAGCTACATCGATCTGCCCCACAACTTGAAATCGTGCTTTCTTTATCTAGGCCTCTTTCCAGAAGATCAGGTAATCTCCAAGAGAACATTACTGCTTCTATGGATGGCTGAGGGTTTTGTTCCACAGCAAGATGAACAAAGACTGGAGGACACTGCTGAGGATTATTTGAATGAGTTAATCAATAGAAACTTGGTTCAAGCGGTAGCAGTGAGTGTTAATGAGAGAGTTACAGAATGCCGGATTCATGATCTAGTACGGGATTTATGCATAAAAAAAGCCAAGGAGCAAAACTTTGTTGAGATTCAAAAGGACATAGTTTCTCTTCCCTCAACTACTTCATCTTTTCCTTTCACCAAATCCCGTCGACTAGGTATTTATTTGGACTTGGAGAGGTATGCTTCCAGAGAACATTCAACCCCATATATTCGGTCTCTCTTCTTTTTTTTACTCCAACGTAGTCCCCATAGTCGATATTATGGGATACTATCATGGTTAGATTTTATTTACAAATATTACAAATTACTTAGAGTGTTAGACTTGGGAAATGTAAAGATCTATGAGCCACCAAATTCATTTGGGAAACTAGTTCATTTAAGGTACTTGAGATTAACAGCGCATAGGTATTCAAACTGTCCACCTTCTTGTTTGGGGAGTTTGCAGGACTGTGTAAACTTTCCAACCTCCTTAGATGAGCTAAGGAGTTTACAGACTTTGGATATATGTATTTCTAAAGGAACACCAACTATGATAGAGAAAATGAAAAATCTACGACACCTTTTCCTCTCGTATGATAGAGAAGATGACAAGCCATTACGGATTGACAATCTAAGAAATCTCCAAACTCTGTCCGGAATATGGTTTAGTGATTGGCAACAAAATGACACAAGTGACTTAACTAGCCTTCGGAAACTGAAAATAAAAATGGATGACGCGATAGTGGTCGAGTTTTCAAACTCCATTGCTAAGCTTGAGAATCTTCGCTCCTTGTATCTTAAGGCATCACATTTCTCCGGGGTTCCATCCTTTGACATGAGCTCTTTGCTACATCTATCTAAGCTGCATATGGAAAGATCCATAGGGCAATTACACGAGTTCCCACCAAATCTAACACAGCTGACCTTAGAAGATACTGAGCTAGACTATGACCCAATGGTGATTTTGGAGAAGCTGCCAAAATTGTTGACTTTAAGATTAAGAATGTGGTCATACCGTGGATGGGAAATGCAAGTATCTGCAGATGGCTTTCCTCAACTCAAAATCCTTCAACTTTCTGACTTATACGGACCGACGAAGTTGTTGATTATAGAGAAGGGTGGCATGTCAAACCTTACTCAGTTACAGATTTTTAGAAGTGTCTTGGACATCTATGGACTTGGTGAGCTCTTACATCTGAAGAGGATAGATGTCATTGATATATCTCCACATTCTCATCGCTGGATTTCTTCTTTACCCTGTTCTTCTGAATGGCAAGATATAAGAAGCAAGACGGAAGAAGGCAAGGATATATGGCACTTATACCGCCAATGA 2727 0.4188 MERAVISFVVNRIGDQLMEEAIFLKEVRPRIERLHRDLKAINCFLEAADAKQEEDPRVRNWVSDIRDVAYDAEDVVDMFILKAEALRRKIFVKRIFQKPVYLHNLGKKIDEIQTNLHDISRRREILGIKNIGVGTSTSSQMLQNLRRTTPRAEKHVIVGLNEEANKLVEQLTTGDPRRRVVSIVGMGGIGKTTLAKKVYNHSRVMDHFQSCRVWVYVSEDCRPRNIFQQILNQLLHNPKQIEKLQENELEDLLHEHLEEKRFLVVLDDIWKSDDWKCLARVFPEESNGSRLLLTTRNKDVALQADARSVPHDMQLLSEEEGWKLFCRTAIPDNVTDGCPPELKEFGEKMVKKCAGLPLAIVVLGGLLSSKKQLPTMWEEVFNKLRVHFAARNGVDAILSLSYIDLPHNLKSCFLYLGLFPEDQVISKRTLLLLWMAEGFVPQQDEQRLEDTAEDYLNELINRNLVQAVAVSVNERVTECRIHDLVRDLCIKKAKEQNFVEIQKDIVSLPSTTSSFPFTKSRRLGIYLDLERYASREHSTPYIRSLFFFLLQRSPHSRYYGILSWLDFIYKYYKLLRVLDLGNVKIYEPPNSFGKLVHLRYLRLTAHRYSNCPPSCLGSLQDCVNFPTSLDELRSLQTLDICISKGTPTMIEKMKNLRHLFLSYDREDDKPLRIDNLRNLQTLSGIWFSDWQQNDTSDLTSLRKLKIKMDDAIVVEFSNSIAKLENLRSLYLKASHFSGVPSFDMSSLLHLSKLHMERSIGQLHEFPPNLTQLTLEDTELDYDPMVILEKLPKLLTLRLRMWSYRGWEMQVSADGFPQLKILQLSDLYGPTKLLIIEKGGMSNLTQLQIFRSVLDIYGLGELLHLKRIDVIDISPHSHRWISSLPCSSEWQDIRSKTEEGKDIWHLYRQ* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0119 908 Gene3D Ribonuclease Inhibitor 561 708 IPR032675 -
Vvi3g0119 908 PANTHER DISEASE RESISTANCE PROTEIN RP 45 843 IPR044974 GO:0006952
Vvi3g0119 908 FunFam Probable disease resistance protein At1g63360 402 491 - -
Vvi3g0119 908 FunFam Probable disease resistance protein At1g61300 139 307 - -
Vvi3g0119 908 Gene3D - 134 309 IPR027417 -
Vvi3g0119 908 SUPERFAMILY L domain-like 481 879 - -
Vvi3g0119 908 PRINTS Disease resistance protein signature 180 195 - -
Vvi3g0119 908 PRINTS Disease resistance protein signature 353 367 - -
Vvi3g0119 908 PRINTS Disease resistance protein signature 570 586 - -
Vvi3g0119 908 PRINTS Disease resistance protein signature 256 270 - -
Vvi3g0119 908 Pfam Rx N-terminal domain 5 87 IPR041118 -
Vvi3g0119 908 Gene3D - 5 125 - -
Vvi3g0119 908 Pfam NB-ARC domain 163 397 IPR002182 GO:0043531
Vvi3g0119 908 Gene3D - 315 400 IPR042197 -
Vvi3g0119 908 Coils Coil 102 122 - -
Vvi3g0119 908 Gene3D - 401 493 IPR036388 -
Vvi3g0119 908 CDD RX-CC_like 4 121 IPR038005 -
Vvi3g0119 908 Gene3D Ribonuclease Inhibitor 709 890 IPR032675 -
Vvi3g0119 908 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 416 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0119 Vvi-Chr3 1044353 1047456 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0119 179 503 WRKY Transcription Factor Family AT5G45050 29.191 5.50e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0119 - - vvi:100260633 1774.6