Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0111 ATGTGCCCCATTCGAGTCCACTGGCATGTTAAGAACAACTACATGTCCCACTGGAGGGTGAAACTGACAATCTCAAACTACAACCTCGCGAAAAACTACTCAGATTGGAACATATTGGTTCAGCACCCTGGTTTCAGCCAGAATACAACAACATACAGCTTCAACAGCACAGCACTTCCCACTGTTGGGTTTGCAGATGAGATTGCTCTCTTCTGGGGAGTAACCTTCTACAACAATGAGCTTTTGCATGCTGATGACAAGAAACTGGGCTCAGTGACAACAGAGATACTTCTGGGCAAGGACTCAAACTCATTCACATTAAACGGCGGGTGGGCCTTCCCTCGAAGAATATATTTCAATGGTGAGAACTGTGAAATGCCTCTTCCAGACACTTACCCTATGCTGCCAAACGGTTCCTCAACTCAGAAGCTTACTCATCCCCAGTTCTTCCTTCTCCTACTCTGTTTAACTGTCAAAGTTCTAGCTATTTGGCTTTGA 498 0.4538 MCPIRVHWHVKNNYMSHWRVKLTISNYNLAKNYSDWNILVQHPGFSQNTTTYSFNSTALPTVGFADEIALFWGVTFYNNELLHADDKKLGSVTTEILLGKDSNSFTLNGGWAFPRRIYFNGENCEMPLPDTYPMLPNGSSTQKLTHPQFFLLLLCLTVKVLAIWL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0111 165 PANTHER PROTEIN COBRA 1 149 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0111 Vvi-Chr3 993362 994100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0111 1 145 COBRA Gene Family AT5G60920 53.103 6.43e-52 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0111 - - vvi:100264075 345.125