Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0110 ATGACCCTCTGGATCCCAATGGGAACATCACAATTACTTTTGATACTCATAAATGGACAGATGATGGCTATGTGGTTATTGTTTTGGCTCAGGCTCAGCAATTGTTTGTTGCAGGCAAGGGTAACTATCCAAAACTACTATCAGTATCGCCATGTGGAGAAACAGGGTTGGAAGCTAGGATGGACATGGGCCAAGGATGAGGTGATCTGGTCAATGAGTGGAGCCTTTGCGACCCAGCAAGGGAATTGCTCATCCTTCATAGTCCAGACCCCACACTCATGCTTGAAAAACCCTGTCATAGTTGATCTGGAGCCGACTGCTGCACCAGAAAACATGACCGAGGACTGCTGCCATGGTGGCATTCTTTCTGCTTGGGCTATCATTCCTTCCAATTCATTCTCATCCTTTGAGATTATGGTAGGAAACTTGGAGGGGAATACTCATGGCAACAAGCCTCTAAATCTTACTCTAATGGCACCAGGTCCTGGTTACACTTGTAGCCCAATTGAGGATACTGATCCCACAGTTTCTTTAGTTATTGGGGGTAGAAGAGAAATCCAAGTTTTCAGGACATGGAAATCAACTTGCACTTACTCTACCTTTCTGTCCAACAAAGTGCCAGTTTGCTGTGTTTCACTCTCAACATTTTACAGTCCCACCATAACCACATGCCCTCAATGCAGCTGTGGATGCAGAGATGCAAACCCCAGTACAGATTCATGTATTAGGTGTGTTCCTCGCTATCACAGTTGA 753 0.4542 MTLWIPMGTSQLLLILINGQMMAMWLLFWLRLSNCLLQARVTIQNYYQYRHVEKQGWKLGWTWAKDEVIWSMSGAFATQQGNCSSFIVQTPHSCLKNPVIVDLEPTAAPENMTEDCCHGGILSAWAIIPSNSFSSFEIMVGNLEGNTHGNKPLNLTLMAPGPGYTCSPIEDTDPTVSLVIGGRREIQVFRTWKSTCTYSTFLSNKVPVCCVSLSTFYSPTITTCPQCSCGCRDANPSTDSCIRCVPRYHS* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0110 250 Pfam COBRA-like protein 38 199 IPR006918 GO:0010215|GO:0016020
Vvi3g0110 250 PANTHER PROTEIN COBRA 37 243 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0110 Vvi-Chr3 991431 993320 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0110 39 235 COBRA Gene Family AT3G29810 52.020 8.16e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0110 - - vvi:100264075 442.195