Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0101 ATGGTGGCGGCAGCCTTACAATCAAGCCAGGGCACAGATGATAGTGGAAATCTGAAGTTAGGGGCAGTACTGGTGGAGAGGGGAGGACTGAGGAGGCGGATTGGTACGAGAAGAGGTCAAAAAAATAGAGTGATGGGTATCCGTTTGCCGTCCAAGATTCATAATGCCAAGCAGATTCTGAAACTGCAGTCACTTCTTAGTAGAAACCAGTCCAGTGTGCCAAAAGGCCATTGTGCAGTATATGTGGGAGAAATCCAGAAGAAGAGATTTGTGGTTCCGATATCTTATTTGAATCATCCTGCCTTTCAAGATTTGTTGCATCTAGCGGAGGAAGAGTTTGGCTTTGATCATCCGATGGGCGGTCTCACGATTCCATGCGAAGAAGATGCCTTCATTGATCTCACTTCTCGATTGAATGCGATGTCAGTGATGTAA 435 0.4621 MVAAALQSSQGTDDSGNLKLGAVLVERGGLRRRIGTRRGQKNRVMGIRLPSKIHNAKQILKLQSLLSRNQSSVPKGHCAVYVGEIQKKRFVVPISYLNHPAFQDLLHLAEEEFGFDHPMGGLTIPCEEDAFIDLTSRLNAMSVM* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0101 144 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 56 138 IPR003676 GO:0009733
Vvi3g0101 144 Pfam Auxin responsive protein 57 137 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0101 Vvi-Chr3 922119 927953 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0101 57 131 Calmodulin-binding Proteins AT3G43120 44.048 1.03e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0101 K14488 - vvi:100255446 204.527