Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0097 ATGGGTTTTCGTTTGCCTGGGATGTTTGCTGCTAAGCAGGGCGCAGAGGCCAAAAATGTGCCTAAAGGCTATTTGGCTGTTTATGTGGGAGAAGCCCAGAAGAAGAGGTTTGTGGTTCCAATCTCATACTTGAGGAATCCTTCTTTCCAGCAGTTGTTGAGTCAGGCTGAAGAAGAGTTTGGATTTGATCATCCAATGGGTGGTCTCACAATCCCATGTACAGAGGAGGCCTTCATTGATATTACTAGTAGTTTGAACAGCTTATGA 267 0.4494 MGFRLPGMFAAKQGAEAKNVPKGYLAVYVGEAQKKRFVVPISYLRNPSFQQLLSQAEEEFGFDHPMGGLTIPCTEEAFIDITSSLNSL* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0097 88 Pfam Auxin responsive protein 15 84 IPR003676 GO:0009733
Vvi3g0097 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0097 Vvi-Chr3 910867 911133 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0097 19 78 Calmodulin-binding Proteins AT3G43120 56.667 1.11e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0097 K14488 - vvi:100265736 179.489