Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0094 ATGGCCATCCGTTTTCAGAGGATTATTCCTGCCAAGCAGATCCTGAGACGCATTCTTCCATCTCCAGAGCCCACAAATGTGCCCAAAGGCTATGTTCCTGTCTATGTTGGAGAAACTCAGAAGAAGAGATTTGTGATTCCAATTTCATACCTGAAGCATCATTCATTCCAAAACTTGCTAAGTCAGGCTGAGGAAGAGTTCGGGTTTGATCATCCACTGGGTGGACTCACAATCCCATGCAGAGAAGAAGCCTTCATCAATCTAACTTACAGCTTGAATTGCTCATGA 288 0.4444 MAIRFQRIIPAKQILRRILPSPEPTNVPKGYVPVYVGETQKKRFVIPISYLKHHSFQNLLSQAEEEFGFDHPLGGLTIPCREEAFINLTYSLNCS* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0094 95 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 24 91 IPR003676 GO:0009733
Vvi3g0094 95 Pfam Auxin responsive protein 21 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0094 Vvi-Chr3 903282 903569 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0094 21 94 Calmodulin-binding Proteins AT3G43120 54.667 9.67e-19 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0094 K14488 - vvi:100264191 188.734