Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0091 ATGGCTATCCGTTTTCAGAGGATTATTCCTGCCAAGCAGATCCTGAGACGCATTCTTCCATCTCCAGAGCCCACAAATGTGCCCAAAGGCTATGTTCCTGTCTACGTTGGAGAAACTCAAAAGAAGAGATTTGTGATTCCAATTTCATACCTGAAGCATCCTTCATTCCAAAACTTGCTAAGTCAGGCTGAGGAAGAGTTCGGGTTTGATCATCCACTGGGTGGACTTACAATCCCATGCAGAGAAGAAGCCTTCATCAATCTAACTTGTGGCTTGAATTGCTCATGA 288 0.4444 MAIRFQRIIPAKQILRRILPSPEPTNVPKGYVPVYVGETQKKRFVIPISYLKHPSFQNLLSQAEEEFGFDHPLGGLTIPCREEAFINLTCGLNCS* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0091 95 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 24 90 IPR003676 GO:0009733
Vvi3g0091 95 Pfam Auxin responsive protein 21 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0091 Vvi-Chr3 894854 895141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0091 21 85 Calmodulin-binding Proteins AT3G43120 57.576 2.81e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0091 K14488 - vvi:100264191 198.749