Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0067 ATGAAGCCGACCATTGGGAACGGCGACAAGATCCGGCACATTGTGAGGATCCAGAAAATGCTTCGTCGATGGCGGAGGATGGCTGCGTGTTCGTCGTCGTGTGCGTCAGATGTAGTCATTAGGGTTCCGTCCGACGTCCCAGCCGGCCACGTCGCGATCTGCGTGGGGAGCAGGTACAGGAGGTTCATCGTGCGCGCGTCGTACCTGAACCACCCCGTCTTCAAGACGCTCCTCCTCCAAGCCGAGGAAGAGTACGGCTTCGCCAACCACGGTCCCCTGGCGATTCCCTGCGACGAGTCGGTGTTCGAGGAGGTCCTCCGAGTAGTGTCCAGGCGCGAATCGAGCCTCTCGCCGCGAGTCACCATGGTTGACGACTTCCAGAGATCCTGCCACGTGGAGTCTCGGCCGTTGCTCCACCGTTTCGCGGAGAATTCCATATGTTAA 444 0.6014 MKPTIGNGDKIRHIVRIQKMLRRWRRMAACSSSCASDVVIRVPSDVPAGHVAICVGSRYRRFIVRASYLNHPVFKTLLLQAEEEYGFANHGPLAIPCDESVFEEVLRVVSRRESSLSPRVTMVDDFQRSCHVESRPLLHRFAENSIC* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0067 147 Pfam Auxin responsive protein 17 108 IPR003676 GO:0009733
Vvi3g0067 147 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0067 Vvi-Chr3 738165 738608 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0067 5 147 Calmodulin-binding Proteins AT4G34750 49.677 1.89e-46 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0067 K14488 - vvi:100262469 259.61