Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0066 ATGCAGCCGGTCGGGAGCAGCGACAAGATCCGGCACATTGTGAGGATCCGGAAAATGCTCCGTCGCTGGCGAAGGAAGGCTGCATCGTCAGGTGGTCGCATTAGGGTCCCGTCAGACGTCCCAGCCGGCCACGTGGCGATCTGCGTGGGGAGCGGGTGCAGGAGGTTCATTGTGCGCGCGTCGTACCTGAACCACCCCGTCTTCAAGGCGCTGTTCCTTGAAGCCGAGGAGGAGTACGGCTTCGCTAACCACGGCCCGCTCGCGATTCCCTGCGACGAGTCGGTGTTCGAGGAGGTCCTCCGAGTGGTGTCCAGGTCCGAGTCGAGCCACCCGCCGCGACTCACCATCGGTGACGACTTCCAGAGACGCTGCCACGTGGAGTCTCGGCCGTTGCTCCACGGTTTTGCCGAGAAATCTATATGTTAA 426 0.6244 MQPVGSSDKIRHIVRIRKMLRRWRRKAASSGGRIRVPSDVPAGHVAICVGSGCRRFIVRASYLNHPVFKALFLEAEEEYGFANHGPLAIPCDESVFEEVLRVVSRSESSHPPRLTIGDDFQRRCHVESRPLLHGFAEKSIC* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0066 141 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 25 100 IPR003676 GO:0009733
Vvi3g0066 141 Pfam Auxin responsive protein 15 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0066 Vvi-Chr3 736482 736907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0066 4 141 Calmodulin-binding Proteins AT4G34750 52.632 4.31e-49 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0066 K14488 - vvi:100252169 265.388