Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0062 ATGGCAGCTTCAAGCAATTTCAGTTCTATCTCACGCTCTGGTGAAAAACCCTATTCTCTGTCTGTCAACCCTTCTAAGGCCCCTGTCTGTTTTAGTCCTAAAACCCTTCAAAAACCATCCTTTGTTCACAGACCCTCATCCTGTCAGCCCCTTTCTCAAGCCCACAAACCCGCTGTGGTTTTATCCTCGAAAAATCCCATTGCCGGTGTTGTATCTGCAGGTAACGCTGACCCAGATAGCGGTTTTGTTCTGTCCGATCACGACGAGAAGCCCCGGGAAGAATGCGGGGTCGTCGGTATCTATGGCGACCCCGAAGCCTCCAGGCTCTGTTATCTCGCTCTCCACGCCCTCCAGCATCGCGGCCAGGAAGGCGCCGGGATTGTCACCGTCAACAACAACGTTCTTCAGTCGATTACCGGCGTTGGACTCGTCTCGGATGTGTTCAACCAGTCTAAACTGGAGCAGTTGCCTGGAGACTCTGCTATAGGGCATGTGCGTTACTCGACTGCTGGTTCCTCCATGCTCAAGAACGTCCAGCCCTTTGTTGCCGGGTACCGATTCGGGTCGGTTGGGGTTGCCCACAACGGTAATTTGGTGAATTATCGGGCGCTTCGGGCGAAGCTGGAAGATAGCGGGTCGATTTTTAATACTAGTTCTGATACCGAGGTGGTTCTCCACCTTATTGCGATTTCAAAGGCCAGGCCTTTCTTTTTGAGGATTGTTGATGCTTGTGAGCAGCTTCAGGGGGCATATTCTATGGTGTTTTTGACCGAGGACAAGCTGGTTGCTGTGCGAGACCCCTATGGGTTTAGGCCATTGGTCATGGGGAGGAGGAGTAATGGCGCTGTGGTGTTTGCCTCAGAGACTTGTGCCCTTGACTTGATCGAAGCTACATATGAGAGGGAAGTGTATCCAGGCGAAGTGTTAGTGGTGGATAAAGATGGGGTTCAGTCCCTTTGTTTGATGCCCCACCCTGAACCGAAGAAATGTATATTTGAGCATATCTACTTCTCCATGCCCAATTCGGTTGTTTTTGGTAAGTCGGTTTATGAATCTCGGCGGGCATTCGGGGAAATTCTTGCCACAGAAGCTCCGGTTGATTGCGATGTTGTGATAGCAGTGCCGGATTCAGGGGTGGTGGCTGCATTAGGTTTTGCAGCCAAAGCAGGGGTGGCCTTTCAGCAGGGGCTGATAAGGTCACACTATGTTGGAAGGACTTTCATTGAGCCATCACAAAAGATTAGGGACTTTGGAGTGAAGCTCAAACTCTCTCCGGTCCGAGCCGTATTGGAAGGGAAGAGGGTTGTGGTGGTGGATGACTCAATTGTGAGGGGCACCACTTCTTCGAAAATTGTTAGGTTGATTAAGGAGTCAGGGGCTAAAGAAGTTCATATGAGGATTGCGAGCCCCCCAATTATTGCATCTTGTTATTATGGAGTGGACACACCGAGTCCAGAGGAATTGATATCCAATAGGATGAGTGTGGAGGAGATCAGGGAGTTTATCGGATGTGATTCGCTTGCTTTTCTGCCAATCAACAGCATGAAGAAGTTGTATGATGAGGAAGCTCCAAATTATTGTTATGCTTGTTTCACTGGAAACTACCCAGTGCTACCTACAGAGCTTAAAGTGAAAAGGGTTGGTGATTTTGTGGATGATGGGTTGAATGGTAGTATAGAATCCATTGATGGGGGTTGGGTTCAAGCATCTAGGAATCAGGTGGCTCAGAAGGTGGCTAGCAGTTCCTGA 1749 0.4946 MAASSNFSSISRSGEKPYSLSVNPSKAPVCFSPKTLQKPSFVHRPSSCQPLSQAHKPAVVLSSKNPIAGVVSAGNADPDSGFVLSDHDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVNNNVLQSITGVGLVSDVFNQSKLEQLPGDSAIGHVRYSTAGSSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRALRAKLEDSGSIFNTSSDTEVVLHLIAISKARPFFLRIVDACEQLQGAYSMVFLTEDKLVAVRDPYGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVYPGEVLVVDKDGVQSLCLMPHPEPKKCIFEHIYFSMPNSVVFGKSVYESRRAFGEILATEAPVDCDVVIAVPDSGVVAALGFAAKAGVAFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLIKESGAKEVHMRIASPPIIASCYYGVDTPSPEELISNRMSVEEIREFIGCDSLAFLPINSMKKLYDEEAPNYCYACFTGNYPVLPTELKVKRVGDFVDDGLNGSIESIDGGWVQASRNQVAQKVASSS* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0062 582 SUPERFAMILY PRTase-like 330 538 IPR029057 -
Vvi3g0062 582 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 95 314 IPR017932 -
Vvi3g0062 582 CDD PRTases_typeI 357 468 IPR000836 -
Vvi3g0062 582 Pfam Phosphoribosyl transferase domain 353 464 IPR000836 -
Vvi3g0062 582 Gene3D - 354 518 IPR029057 -
Vvi3g0062 582 Hamap Amidophosphoribosyltransferase [purF]. 94 535 IPR005854 GO:0004044|GO:0009113
Vvi3g0062 582 NCBIfam amidophosphoribosyltransferase 95 536 IPR005854 GO:0004044|GO:0009113
Vvi3g0062 582 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 95 536 IPR029055 -
Vvi3g0062 582 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 93 541 - -
Vvi3g0062 582 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 95 318 IPR029055 -
Vvi3g0062 582 CDD GPATase_N 95 345 IPR035584 -
Vvi3g0062 582 Pfam Glutamine amidotransferase domain 175 292 IPR017932 -
Vvi3g0062 582 MobiDBLite consensus disorder prediction 1 25 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0062 86 568 PRT Gene Family AT4G34740 86.570 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0062 K00764 - vvi:100250446 1142.87