Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0037 ATGGACAGTCATGACTGTATAAATACTCTCAGAAATCACGCTGATTCACAACATCCAGTCATGGCATCTCCTCTGCAGTCTCTCCTCACCTTTCCCTCCCTCTTCTTCCTACTTTTCTCTCTTTTCCTTTTCATTATTTTCTTAAGAAATTTTTCAAGAAAACTCCCATATCCACCAGGGCCCAAAGGCCTGCCGATCATCGGAAATATGTTGATGATGAATCAACTCACCCACCGGGGACTAGCCAATCTCAGCAAGGTGTACGGTGGCCTGCTGCATATGAAGATGGGAGTCTTGCACTTAGTGGTCGTGTCCACCCCGGAGATGGCTCGTGAAGTTCTCCAGGTGCAGGACAGTGTTTTCGCCAACCGGCCAGCCAGGGTTGCGATAAAATATCTGACATATGATAGAGCGGACATGGCCTTCGCTCAATACGGACCCTCTTGGCGGCAGATGAGGAAGATTTGTGTGATGAAGCTCTTCAGTCGAAAACGGGCTGAGTCTTGGGCGTCAGTGAGGGAGGAGGTGGATTCAACGCTTCAAAGTATCGCCAAGAGAGGTGGGTCTGCTGTTAATATTGGTGAATTGGCGTTGGACCTTACCAAGAATATAACGTACAGGGCTGCGTTCGGGTCGAGTTCGCGCGAAAAACAGAAGGAGTTCGTGAAGATTTTGCAGGAGTTCTCGAGGCTTTTTGGGGCTTTCAACTTTGCAGATTTTATACCCTGGCTGGGTTGGATTCAAGGGAAGGAGTTCACTAAGCGGCTGGTCAAGGCTCGAGGATCACTTGATGAGTTCATCGATAAAATCATCGACGGTCACATTGAAAAGAGGAAGAAGCAGAATAACAGCGGAGATGAAAGTGAAAGTGAAGCAGAGTTGGACATAGTGGACGAGTTAATGGAGTTTTACAGCAAAGATGTTGCAGCGGAAGACTTGAATTCTTCAATCAAGTTCACAAGGGATAACATCAAAGCTATCATTATGGACGTGATGTTTGGTGGAACAGAAACTGTGGCATCGGCAATCGAGTGGGCAATGGCGGAGCTCATGAAAAGCCCAGATGATCTGAAGAAACTGCAGCAAGAATTAATAGATGTGGTGGGCTTGAACCGAAGGTTACACGAGTCCGATCTGGAGAAGCTCACCTACCTCAAGTGCTGCATCAAGGAAACCCTCCGGCTCCACCCTCCAATCCCAGTCCTCCTCCACGAGACCGCCGAGGACAGTGTGGTGGCCGGATACTCAGTCCCAGCACGCTCAGATGTCATGATCAACGCCTGGGCTATAAACCGAGACAAGACCGCCTGGGAGGATCCGGAGACGTTCAAGCCAGAGAGGTTTCTGAAGGACGCACCTGATTTCAAAGGGAGCCACTTTGAGTTCATTCCATTTGGGTCCGGCCGGCGGTCGTGCCCGGGTATGCAGCTTGGGCTGTATGGATTGGATCTGGCTGTGGGTCACCTTGTTCATTGTTTTAGCTGGGAACTGCCTGATGGAATGAAGGCTAGTGATCTGGATATGAGCGATGTGTTTGGACTCACTGCTCCGAGGGCGATACAGCTGATCGCAGTGCCGACTTATCGCCTGCAGTGTCTGCTCCTTGAGTGA 1611 0.4984 MDSHDCINTLRNHADSQHPVMASPLQSLLTFPSLFFLLFSLFLFIIFLRNFSRKLPYPPGPKGLPIIGNMLMMNQLTHRGLANLSKVYGGLLHMKMGVLHLVVVSTPEMAREVLQVQDSVFANRPARVAIKYLTYDRADMAFAQYGPSWRQMRKICVMKLFSRKRAESWASVREEVDSTLQSIAKRGGSAVNIGELALDLTKNITYRAAFGSSSREKQKEFVKILQEFSRLFGAFNFADFIPWLGWIQGKEFTKRLVKARGSLDEFIDKIIDGHIEKRKKQNNSGDESESEAELDIVDELMEFYSKDVAAEDLNSSIKFTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPDDLKKLQQELIDVVGLNRRLHESDLEKLTYLKCCIKETLRLHPPIPVLLHETAEDSVVAGYSVPARSDVMINAWAINRDKTAWEDPETFKPERFLKDAPDFKGSHFEFIPFGSGRRSCPGMQLGLYGLDLAVGHLVHCFSWELPDGMKASDLDMSDVFGLTAPRAIQLIAVPTYRLQCLLLE* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0037 536 Gene3D Cytochrome P450 48 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0037 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Vvi3g0037 536 Pfam Cytochrome P450 58 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0037 536 FunFam Cytochrome P450 84A1 50 528 - -
Vvi3g0037 536 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0037 536 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0037 536 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0037 536 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0037 536 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0037 536 PRINTS E-class P450 group I signature 109 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0037 536 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0037 536 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0037 536 PANTHER CYTOCHROME P450 84A1-RELATED 34 534 - -
Vvi3g0037 536 CDD CYP71-like 88 522 - -
Vvi3g0037 536 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0037 536 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0037 536 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0037 536 SUPERFAMILY Cytochrome P450 58 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0037 Vvi-Chr3 510038 511819 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0037 37 534 Monolignol Biosynthesis Gene Families AT4G36220 66.799 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0037 K09755 - vvi:100253771 978.778