Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0032 ATGGCATCTCCTCTGCAGTCTCTCCTCACCTTTCCCTCCCTCTTCTTCCTACTTTTCTCTCTTTTCCTTTTCATTATTTTCTTAAGAAAATTGTCAAGAAAACTCCCATATCCACCAGGGCCCAAAGGCCTGCCGATCATCGGAAATATGTTGATGATGAATCAACTGACCCACCGGGGACTAGCCAATCTCAGCAAGGTGTACGGTGGCCTGCTGCATATGAAGATGGGAGTCTTGCACTTAGTGGTCGTGTCCACCCCGGAGATGGCTCGTGAAGTTCTCCAGGTGCAGGACAGTGTTTTCGCCAACCGGCCAGCCAGGGTTGCGATAAAATATCTGACATATGATAGAGCGGACATGGCCTTCGCTCAATACGGACCCTCTTGGAGGCAGATGAGGAAGATTTGTGTGATGAAGCTCTTCAGTCGAAAACGGGCTGAGTCTTGGGCGTCGGTGAGGGAGGAGGTGGATTCAACGCTTCAAAGTATCGCCAAGAGAGGTGGGTCTGCTGTTAATATTGGTGAATTGGCGTTGGACCTCACCAAGAATATAACGTACAGGGCTGCGTTCGGGTCGAGTTCGCGAGAAAAACAGGAGGAGTTCGTGAAGATTTTGCAGGAGTTCTCGAGGCTTTTTGGGGCTTTCAACTTTGCAGATTTTATACCCTGGCTGGGTTGGATTCAAGGGAAGGAGTTCAATAAGCGGCTGGTCAAGGCTCGAGGATCACTTGATGAGTTCATCGATAAAATCATCGACGATCACATTGAAAAGAGGAAGAAGCAGAATAACAGCGGAGATGAAAGTGAAAGTGAAGCAGAGTTGGACATGGTGGACGAGTTAATGGAGTTTTACAGCGAAGATGTTGCAGCGGAAGACTTGAATTCTTCAATAAAGTTCACAAGGGATAACATCAAAGCTATCATTATGGACGTGATGTTTGGTGGAACAGAAACTGTGGCATCGGCAATCGAGTGGGCAATGGCGGAGCTCATGAAAAGCCCAGATGATCTGAAGAAACTGCAGCAAGAATTAACAGATGTGGTGGGCTTGAACCGAAGGTTACACGAGTCCGATCTGGAGAAGCTCACCTACCTCAAGTGCTGCATCAAGGAAACCCTCCGGCTCCACCCTCCAATCCCAGTTCTCCTCCACGAGACCTCCGAGGCTAGTGTGGTGGCCGGATACTCAGTCCCAGCACGCTCAGATGTCATGATCAACGCCTGGGCTATAAACCGAGACAAGACCGCCTGGGAGGATCCGGAGACGTTCAAGCCAGAGAGGTTTCTGAAGAAGGACGCACCTGATTTCAAAGGGAGCCACTTTGAGTTCATTCCATTCGGGTCCGGCCGGCGGTCGTGCCCGGGTATGCAGCTTGGGCTGTATGGATTGGATCTGGCTGTGGCTCACCTTGTTCATTGTTTTAGCTGGGAACTGCCTGATGGAATGAAGGCTAGTGATCTGGATATGAGCGATCTGTTTGGACTCACTGCTCCGAGGGCGATACAGCTGGTCGCAGTGCCGACTTATCGCCTGCAGTGTCCGCTCCTTGAGTGA 1554 0.5039 MASPLQSLLTFPSLFFLLFSLFLFIIFLRKLSRKLPYPPGPKGLPIIGNMLMMNQLTHRGLANLSKVYGGLLHMKMGVLHLVVVSTPEMAREVLQVQDSVFANRPARVAIKYLTYDRADMAFAQYGPSWRQMRKICVMKLFSRKRAESWASVREEVDSTLQSIAKRGGSAVNIGELALDLTKNITYRAAFGSSSREKQEEFVKILQEFSRLFGAFNFADFIPWLGWIQGKEFNKRLVKARGSLDEFIDKIIDDHIEKRKKQNNSGDESESEAELDMVDELMEFYSEDVAAEDLNSSIKFTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPDDLKKLQQELTDVVGLNRRLHESDLEKLTYLKCCIKETLRLHPPIPVLLHETSEASVVAGYSVPARSDVMINAWAINRDKTAWEDPETFKPERFLKKDAPDFKGSHFEFIPFGSGRRSCPGMQLGLYGLDLAVAHLVHCFSWELPDGMKASDLDMSDLFGLTAPRAIQLVAVPTYRLQCPLLE* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0032 517 PANTHER CYTOCHROME P450 84A1-RELATED 14 515 - -
Vvi3g0032 517 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0032 517 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0032 517 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0032 517 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0032 517 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0032 517 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0032 517 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0032 517 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0032 517 FunFam Cytochrome P450 84A1 30 509 - -
Vvi3g0032 517 Gene3D Cytochrome P450 31 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0032 517 Pfam Cytochrome P450 38 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0032 517 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0032 517 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0032 517 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0032 517 CDD CYP71-like 68 503 - -
Vvi3g0032 517 SUPERFAMILY Cytochrome P450 38 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g0032 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0032 Vvi-Chr3 457065 458789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0032 17 515 Monolignol Biosynthesis Gene Families AT4G36220 66.004 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0032 K09755 - vvi:100250277 980.319