Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1159 ATGACTAAGCCTGTTGTCATGACATTCTTTGTACTAGGGTTAACTGGGATATTTGGGAACCAGCTTCTGTTTCTTATTGGACTTAGCTACACAAATCCAACTTATGCAGCTGCCACACAACCTGCAATTCCAGTCTTTACATTTATATTGGCTACAATAATGGGTACAGAAACAGTTAATTTACTCAGAACTGAAGGTCAGGTGAAGGTTGGAGGTACACTTGTATGTGTTTCTGGTGCCATATTAATGGTTCTGTTTCGAGGCCCAGTTTTAATCGGATATTCAGAGTCAGACCCTTCAATGGAGAATGAAATAATTGCCCGGGGTCAACCAGAGCCTGCTGGATGGTTAATGTATAGCTTTATGGAGTATGGGCTAGGACAGTGGCACCTTGGTGTGTTATGCTTAATTGGAAACTGTTTGTGCATGGCAGCTTATTTAGCCATTCAGGCTCCACTTTTGAAGAAGTATCCAGCCAGCCTTTCAGTCACAGCATATTCATACTTTTTTGGTGCTTTATTTATGGTAGTGACAGCATTCGTTATGACTAATGAGTCAACAGATTGGAGTTTGACGAAGTCTGAACTTTTCGCAGTCTGCTATGCTGGAGTAGTTGCTTCTGCCATTAACTATGGGCTCCTGACATGGTCCAATAAGATCTTGGGGCCTTCTTTGGTTGCTCTGTATAATCCACTTCAACCTGCGGCTTCTGCCTTCCTGTCAAGAATTTTCCTTGGAAGCCCTATTTATTTGGGAAGCATTCTTGGGGGATCTTTAATTATTGCTGGTCTCTATTTGGTCACTTGGGCATCCTACAGGGAAAGACAAGCTGCAATGGGGGTTATCCCTCATGCTATCAGGGCCTCTGAACCACTCATTCACAAAGATGCATCACTCACCAAGATTCCATATCAGAGGGGACATATTTTCTCTGGGCCATCCACCTCATTGCCAAAGGGCTTGGATTGA 969 0.4334 MTKPVVMTFFVLGLTGIFGNQLLFLIGLSYTNPTYAAATQPAIPVFTFILATIMGTETVNLLRTEGQVKVGGTLVCVSGAILMVLFRGPVLIGYSESDPSMENEIIARGQPEPAGWLMYSFMEYGLGQWHLGVLCLIGNCLCMAAYLAIQAPLLKKYPASLSVTAYSYFFGALFMVVTAFVMTNESTDWSLTKSELFAVCYAGVVASAINYGLLTWSNKILGPSLVALYNPLQPAASAFLSRIFLGSPIYLGSILGGSLIIAGLYLVTWASYRERQAAMGVIPHAIRASEPLIHKDASLTKIPYQRGHIFSGPSTSLPKGLD* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1159 322 Pfam EamA-like transporter family 131 268 IPR000620 GO:0016020
Vvi2g1159 322 SUPERFAMILY Multidrug resistance efflux transporter EmrE 192 273 - -
Vvi2g1159 322 SUPERFAMILY Multidrug resistance efflux transporter EmrE 6 87 - -
Vvi2g1159 322 PANTHER WAT1-RELATED PROTEIN 2 275 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1159 Vvi-Chr2 18516563 18524738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1159 26 298 Nodulin-like Gene Family AT5G45370 68.231 5.54e-135 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1159 - - vvi:100263130 617.846