Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1143 ATGAGCTGTAGAGAGATTCCATTTGTGGGATTCGAGCTGTATTTTCTGATATTTCATTGCCCCCCATCTCCCTCATATCCCTCCTTTCTTATTATAAATACCCCCCTTTTCTTCTCCACTCCTCACACCCATCCTCCACCTCCTCTCTTCTTCACTCTCTCCACCATCATCAACCCACAACTATTCAAACCACTACTACTTCTAATGGACTCCTCCTTCACCACCATATGCTTCTCCATTGCTCTCCTCCTCTTTCTCATCCACTTTCTCCTAAAGCTCTTCTCCTTCTTCTCTGCTTCCACTGCCCGGAAACTCCCTCTCCCACCTGGCTCTCTGGGCTGGCCCTACATAGGAGAAACCTTTCAGCTTTACTCTCAGAACCCCAATGTCTTCTTTGCCTCCAAGCAAGAGAGGTATGGAACCATATTCAAAACCCACATATTGGGGTGCCCATGTGTGATGATTTCAAGTCCTGAAGCTGCAAAGCTGGTGCTGGTCACAAAGGCTCCTCTCTTTAAGCCTACATTTCCGGCTAGCAAAGAGAGGATGTTGGGGAAACAAGCAATTTTCTTTCACCAAGGTGACTACCATGCCAAGTTGAGGAAGCTTGTTCTCCGAGCCTTCATGCCAGGAGCCATCAAAAACATCGTCTCTAACATCGACTCCATCGCCACCCAGACCCTGCAGTCCTGGGAAGGCCGGTCGATCAATACTTTCCAAGAAATGAAGACATACACTTTCAATGTTGCACTGCTGTCCATATTTGGAAAAGATGAAATTCTGTACAGAGAGGAACTCAAGAAATGCTACTACATTCTTGAGAAGGGGTATAATTCAATGCCCATAAACATTCCTGGAACGCTCTTTAACAAATCAATGAAAGCAAGGAAGGAATTGGCTCAGATCTTGGCTAAAATCCTCTCAACAAGGAGGCAGGCGAACGGTGATCACAACGACTTGTTGGGATCTTTCATGGGAGACAAAGAAGGGCTCACAGATGAACAAATTGCAGACAACATCATAGGCGTCATCTTCGCGGCCCGAGACACTACTGCCAGTGTGCTGACATGGATCCTCAAGTATCTGGGCGAAAACCCGAGTGTTCTGCAAGCTGTCACGGAAGAGCAAGAGTCCATAATGAGGAGTAAAGAAGACAAGTGTGGTGAAGAGAAGTCTCTGACTTGGGAAGATGCCAAGAAGATGCCAATAACTTCAAGGGTGATTCAAGAAACACTTAGAATTGCTTCAATTTTATCTTTCACCTTTAGAGAGGCTGTTGAAGATGTTGAATTTGAAGGGTACCTGATTCCAAAAGGGTGGAAAGTTTTACCACTTTTCAGAAACATTCACCACAGTCCAGACATATATCCAGAGCCAGAGAAGTTTGATCCCTCAAGATTTGAGGTTGCTCCAAAGCCCAATACATTTATGCCATTTGGAAATGGGGTCCACTCATGCCCTGGGAATGAGTTGGCCAAACTAGAGATTTTGGTGCTTCTACATCATCTGACTACAAAGTACAGGTATGGTGGTCTATGGTGGGCACACAGAATGGTATTCAGTATGGCCCTTTTGCTCTTCCCCAGAATGGTTTGCCCATCACAATCTCCCTCAAGTCATAGAAACAAATCTCTACTAAATCTACTCTCAGTGCCACCAATCAACTTCACTCCCATATTCCTATTCAAAGTTTCAAACAAGAAACAAAGAAACAATATGAAGAGATCTCCCTTGTTTCCTGCCAATCTAGAGACACCCACATGA 1764 0.4495 MSCREIPFVGFELYFLIFHCPPSPSYPSFLIINTPLFFSTPHTHPPPPLFFTLSTIINPQLFKPLLLLMDSSFTTICFSIALLLFLIHFLLKLFSFFSASTARKLPLPPGSLGWPYIGETFQLYSQNPNVFFASKQERYGTIFKTHILGCPCVMISSPEAAKLVLVTKAPLFKPTFPASKERMLGKQAIFFHQGDYHAKLRKLVLRAFMPGAIKNIVSNIDSIATQTLQSWEGRSINTFQEMKTYTFNVALLSIFGKDEILYREELKKCYYILEKGYNSMPINIPGTLFNKSMKARKELAQILAKILSTRRQANGDHNDLLGSFMGDKEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLGENPSVLQAVTEEQESIMRSKEDKCGEEKSLTWEDAKKMPITSRVIQETLRIASILSFTFREAVEDVEFEGYLIPKGWKVLPLFRNIHHSPDIYPEPEKFDPSRFEVAPKPNTFMPFGNGVHSCPGNELAKLEILVLLHHLTTKYRYGGLWWAHRMVFSMALLLFPRMVCPSQSPSSHRNKSLLNLLSVPPINFTPIFLFKVSNKKQRNNMKRSPLFPANLETPT* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1143 587 Gene3D Cytochrome P450 97 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g1143 587 PANTHER CYTOCHROME P450 26 103 514 - -
Vvi2g1143 587 CDD CYP90-like 136 508 - -
Vvi2g1143 587 Pfam Cytochrome P450 108 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g1143 587 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g1143 587 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g1143 587 PRINTS E-class P450 group I signature 355 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g1143 587 PRINTS E-class P450 group I signature 405 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g1143 587 PRINTS E-class P450 group I signature 445 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g1143 587 PRINTS E-class P450 group I signature 136 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g1143 587 PRINTS E-class P450 group I signature 335 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g1143 587 FunFam Abscisic acid 8 97 524 - -
Vvi2g1143 587 SUPERFAMILY Cytochrome P450 103 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g1143 587 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 479 488 IPR017972 GO:0005506|GO:0016705
Vvi2g1143 587 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g1143 587 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g1143 587 PRINTS P450 superfamily signature 406 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g1143 587 PRINTS P450 superfamily signature 346 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1143 Vvi-Chr2 18249018 18251574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1143 78 549 Cytochrome P450 AT4G19230 74.788 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1143 K09843 - vvi:100264783 863.603