Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1130 ATGACTTCTCTTAAGAAACATCATGACAAGTCAGCATTCTCCGGAAAGGCCTTACTTTATCTTAACCGGCATCAAACTGAGGAGTGGAAAGGATGGATGCAGGTTTTATTTCTAATGTACCATTACTTTGCTGCTGCGGAGATATACAATGCAATTCATGTCTTTATTGCTGCATATGTCTGGATGACTGGATTTGGAAACTTCTCCTATTATTACATTAGGAAGGATTTTAGCCTTGCACGTTTTACACAGATGATGTGGCGGCTAAATCTCTTTGTGGCATTTTGCTGTATTGTTCTTAACAATGACTTTATGCTATACTATATGTGCCCCATGCACACGCTTTTCACTCTTATGGTATATGCAACCCTTGCTTTTAAGCTCATCAAAGTTCCCAAAAGACGACCCATGGATCCTCACAAGAAGGGCATGCCAGAAACAGAATTCTTCGCAGAATATGGAGAGGCGAGCAGATACCAAGTCCAGGAAGTCGTTGGCAAAGGAAGTTATGGTGTTGTTGGCTCTGTAATTGATACCCACACTGGAGAAAAGGTTGCAATCAAGAAGATTAATGATGTCTTTGAACATGTCTCTGATGCTACACGGATTCTAAGAGAAATCAAGCTCTTACGGTTGCTTCGGCATCCGGATATCGTAGAAATAAAACATATCATGCTCCCGCCTTCTCGAAGAGAATTTAGAGATATTTACATTGTTTTTTGA 723 0.4039 MTSLKKHHDKSAFSGKALLYLNRHQTEEWKGWMQVLFLMYHYFAAAEIYNAIHVFIAAYVWMTGFGNFSYYYIRKDFSLARFTQMMWRLNLFVAFCCIVLNNDFMLYYMCPMHTLFTLMVYATLAFKLIKVPKRRPMDPHKKGMPETEFFAEYGEASRYQVQEVVGKGSYGVVGSVIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYIVF* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1130 240 Pfam Protein kinase domain 159 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi2g1130 240 ProSiteProfiles Protein kinase domain profile. 159 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi2g1130 240 Pfam 10 TM Acyl Transferase domain found in Cas1p 19 127 IPR012419 -
Vvi2g1130 240 SUPERFAMILY Protein kinase-like (PK-like) 155 240 IPR011009 -
Vvi2g1130 240 FunFam Mitogen-activated protein kinase 149 240 - -
Vvi2g1130 240 Gene3D Phosphorylase Kinase; domain 1 140 240 - -
Vvi2g1130 240 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 7 125 - -
Vvi2g1130 240 ProSitePatterns Protein kinases ATP-binding region signature. 165 189 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1130 Vvi-Chr2 17913253 17913975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1130 118 240 MAP Kinase Gene Family AT1G18150 79.688 2.95e-63 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Vvi2g1130 Cas1_AcylT 4.9e-37 CL0316