Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1128 ATGGCAATGGAATCACCGATATCATTCTCGGTGACCCGAGGCGAGCCACGGCTTGTTGCGCCTGCAAAACCTACGCCGCGCGAGCTGAAGGAACTCTCAGACATAGATGACCAAGAAGGGCTTAGGTTTCAGGTTCCCATAATATTTTTCTATGGAAACAGTTCTTTAATGGATGGAAAAGACCCTGCAAAGGTGATTCGGGAAGCGCTAGCTAAAGCGCTCATTTATTACTACCCGTTTGCGGGTAGGCTTGTAGAAGGGTCTAATAGGAAGCTCCTGGTGGACTGCACCGGGGAAGGCGTCTTGTTCGTTGAGGCTGATGCAGACACCACACTGGAGTATCTGGGCGATGCCATTCAGCCGCCTTGTCCATGTTTTGAGGAGCTTCTATATGATGTTCCTGGCTCGGGAGGGATCCTTGGTTGCCCTTTGTTGTTATTTCAGGTGACGCGTCTGAGGTGCGGAGGGTTTGTTCTTGCACTGCGCCTAAACCACACAATGAGTGATTCCTTCGGGCTGCTGCAGTTCCTGAATGCTGTAAGCGAGATAGCCCAAGGCGCAGAAGTGCCATCTGTGTTGCCCGTGTGGCAAAGGGAGTTATTGAATGCGCGGAATCCACCATGTATAACATGTAGGCATTATGAATTTGAGGAGGTACACGACACCAAGGGCACACTAGGGGTTATGGATGATGACAATACGGTCCACCGATCTTTCTTCTTTGGCCCTAAAGAGATAAGATCCCTCAAGATGCGAATTCCCCAAGCCCTTGGTCCATGCACCACATATGAGGCACTAGCCGCGTGTGTATGGAGATGCCGCACAGTTGCATTTGGTGTAGACCCTAACGAGTTTGTCCGTTTTTCAAGCGCAATGAGCATGCGGGGCAAACGGGGTTTGCAGTTGCCTTCTGGTTACTATGGCAATGCATTTGCCTACCCAGCTGCAATAGCCAAGGTTGGAGAACTCTGTAAAAATCCATTGGGATATGCAGTAGAGTTGGTGAAGAAGGTCAAGGCTGAAATGAGTGAAGAGTACATAAAATCACTGGCAGCTCTTATGGTAATTAAAGGGCGGCCCTTATATACACGCACAGGGTTCTTCATCATTTCTGATAACACCCGGGTTGACTTTCAAGATGTCGATTTCGGTTGGGGGAAACCCTTATATGGTGGGCTTGCTAAGGCTTCTTCTCTTATTAGCTTCTTTCTGCGGTTTAGAAACAGTAAAGGAGAGGAAGGAATTGTTGTCCCAATACAGTTGCCTCTTCCAGTTATGGAAAGGTTTGAACAGGAGGTAAAGAGGATGGTTGCAGAGGAAGCAGTTGAAGTTCCATAA 1338 0.4858 MAMESPISFSVTRGEPRLVAPAKPTPRELKELSDIDDQEGLRFQVPIIFFYGNSSLMDGKDPAKVIREALAKALIYYYPFAGRLVEGSNRKLLVDCTGEGVLFVEADADTTLEYLGDAIQPPCPCFEELLYDVPGSGGILGCPLLLFQVTRLRCGGFVLALRLNHTMSDSFGLLQFLNAVSEIAQGAEVPSVLPVWQRELLNARNPPCITCRHYEFEEVHDTKGTLGVMDDDNTVHRSFFFGPKEIRSLKMRIPQALGPCTTYEALAACVWRCRTVAFGVDPNEFVRFSSAMSMRGKRGLQLPSGYYGNAFAYPAAIAKVGELCKNPLGYAVELVKKVKAEMSEEYIKSLAALMVIKGRPLYTRTGFFIISDNTRVDFQDVDFGWGKPLYGGLAKASSLISFFLRFRNSKGEEGIVVPIQLPLPVMERFEQEVKRMVAEEAVEVP* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1128 445 Gene3D - 10 217 IPR023213 -
Vvi2g1128 445 Pfam Transferase family 10 434 - -
Vvi2g1128 445 Gene3D - 218 433 IPR023213 -
Vvi2g1128 445 PANTHER ACYL TRANSFERASE 4 9 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1128 Vvi-Chr2 17891521 17900419 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1128 18 420 Monolignol Biosynthesis Gene Families AT5G48930 30.952 5.60e-52 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1128 K19861 - vvi:100261448 898.656