Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1126 ATGAGTGATTCCCCCGGGCTGGTGCAGTTCCTGAATGCTGTCAGCGAGATGGCCAGAGGCGCAGATGTGCCACCTGTGCTGCCCGTCTGGGAAAGGGAGCTCTTGAATGCGCGAAATCCGCCACGTATAACATGTATGCATCACGAATATGAGGAGGTACACGACACCAGGGGTACACTAGGGGTTATGGATGATCATAATACGGTTCACCGATCCTTCTTCTTTGGCCCTAAAGAGATAAAAGCCCTTAGAAAGCGAATTCCCCAGACCCTTGGTCCATGCTCTACATTTGAAGTACTAACAGCCTGTGTATGGAGATGCCGCACGGTTGCCTTTGGGGTAGACCCTGATGAGACTGTCCGTGTTTCATGTCTAAACAACGTGCGGGGCAAACGGGGTTTGCAGTTGCCTTCTGGTTACTATGGCAATGCATTTGCCAACCCAGCTGTAGTTACAAAGGCCGGAGAACTCTGTAACAATCCACTGGGATATGCAGTGAACTTGGTGAAGAAGGCCAAGGCTGAAATGAGCGAGGAGTACATAAGATCAGTAGCAAATTTTATGGTAATTAAAGGGCGGCCCTCCTACACACGTACAGGGAACTTCATCATTTCTGATAACACCCGGGTTGGCTTTCAGGAGATTGATTTCGGGTGGGGGAAGCCCTTATATGGTGGGCTTGCTAAGGCCATGTCTATTATTAGCTTCTGTCTGCGGTTTAGAAATAGTAAAGGAGAGGAAGGGGTTGTTGTCCCGATATGCTTGCCCCTTCAAGTTATGGAAAGGTTTGGACAGGAGGTAAAGAGAATGATCGCAGAGGAAATTGCATCCAAGCTCTAA 840 0.4893 MSDSPGLVQFLNAVSEMARGADVPPVLPVWERELLNARNPPRITCMHHEYEEVHDTRGTLGVMDDHNTVHRSFFFGPKEIKALRKRIPQTLGPCSTFEVLTACVWRCRTVAFGVDPDETVRVSCLNNVRGKRGLQLPSGYYGNAFANPAVVTKAGELCNNPLGYAVNLVKKAKAEMSEEYIRSVANFMVIKGRPSYTRTGNFIISDNTRVGFQEIDFGWGKPLYGGLAKAMSIISFCLRFRNSKGEEGVVVPICLPLQVMERFGQEVKRMIAEEIASKL* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1126 279 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 263 - -
Vvi2g1126 279 Gene3D - 53 267 IPR023213 -
Vvi2g1126 279 Pfam Transferase family 2 268 - -
Vvi2g1126 279 Gene3D - 1 52 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1126 Vvi-Chr2 17864675 17865514 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1126 8 267 Monolignol Biosynthesis Gene Families AT5G48930 26.449 3.54e-24 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1126 K19861 - vvi:100263012 572.392