Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1125 ATGAGACTGTCCGTACGTGTTTCATGTCTAAACAATGTGCGGGGCAAACGGGGTTTGCAGTTGCCTTCTGGTTACTATGGCAATGCATTTGCCAACCCAGCTGCAGTTACAAAGGCCGGAGAACTCTGTAACAATCCACTGGGATATGCAGTGAAGTTGGTGAAGAAGGCCAAGGCTGAAATGAGCGAGGAGTACATAAGATCAGTAGCAGATTTTATGGTAATTAAAGGGCGGCCCTCCTACACACGTACAGGGAACTTCATCATTTCTAATAACACCCGGGTTGGCTTTCAGGAGATTGATTTCGGGTGGGGGAAGCCCTTATATGGTGGGCTTGCTAAGGCCATGTCTATTATTAGCTTCTGTCTGCGGTTTAGAAATAGTAAAGGAGAGGAAGGGGTTGTTGTCCCGATATGCTTGCCCCTTCAAGTTATGGAAAGGTTTGGACAGGAGGTAAAGAGAATGATTGCAGAGGAAGTTGCATCCAAGCTCTAA 495 0.4667 MRLSVRVSCLNNVRGKRGLQLPSGYYGNAFANPAAVTKAGELCNNPLGYAVKLVKKAKAEMSEEYIRSVADFMVIKGRPSYTRTGNFIISNNTRVGFQEIDFGWGKPLYGGLAKAMSIISFCLRFRNSKGEEGVVVPICLPLQVMERFGQEVKRMIAEEVASKL* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1125 164 Gene3D - 2 157 IPR023213 -
Vvi2g1125 164 Pfam Transferase family 12 153 - -
Vvi2g1125 164 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1125 Vvi-Chr2 17855064 17855558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1125 14 111 Monolignol Biosynthesis Gene Families AT5G48930 29.245 3.79e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1125 - K19861 vvi:109124340 323.939