Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1119 ATGGCTAAAGCAAGAACAGGCCACTGGTTAAGCATTCTGGCATTTTCACTGATCTTGCTCAAAACAGAAGGCTTCTATGTGGGAATTACTTATGTGGATAGTGCAGTAGCAAAAGGAGCAGTTTGCTTGGATGGTAGCCCACCTGCTTACCACATGGATAAGGGATTTGGTGCAGGGATTAACAATTGGTTGGTTCATATTGAGGGAGGAGGATGGTGCAACAATGCCTCAACTTGCCTTGCTCGTAGGGACAACCGTTTAGGTTCATCGAAGCAAATGGTGAAGCAAATTGCTTTCTCTGGGATTCTGAGCAACAAGCAAAAATTTAATCCGGACTTCTACAACTGGAACAAGATCAAGGTTAGGTACTGCGATGGGGCCTCCTTTACGGGCGATGTAGAAGCAGTTGATCCTAAGACTAATCTTCACTACAGAGGAGCCCGGGTGTTTCTTGCTGTCATTGAGGATCTTATGGCAAAAGGAATGAAAAATGCTGCAAATGCTGTTCTCTCTGGCTGCTCTGCTGGTGGGCTGACTGCCATTCTGCATTGTGATAAATTTCGCGCTCTTCTCCCTGTCAGCACCAAAGTAAAATGCTTTGCAGATGCCGGTTACTTCATCAACGCTAAGGATGTTTCAGGAGCAGCACACATTGAAGGCTTCTACAGTGAAGTGGTTGCAACACATGGATCAGCAAAGAATCTGCCCCCATCCTGCACTTCAAGTCTAAGACCGGGCTTGTGTTTCTTCCCACAAAACATGGCTCAACAGATCAAAACACCGCTTTTTATCATCAATGCAGCCTATGATTCATGGCAGATAAAGAACATCTTGGCACCGGGTGTCGCTGATCCTCATGGTACTTGGCATTACTGCAAGCTTGATATCAAGGACTGCTCATCCTCCCAACTTGAAGCCATGCAAGATTTCAGGGTGCAGTTTCTTAGTGCAATCAAAGGACTGATAGGCTCCCCCTCCAAAGGAATGTTCATAAACTCCTGCTATGCCCACTGCCAAACCGAAATGCAGGAAACATGGCTGAGGGACGACTCCCCAGTACTTGGAAAAACAACAATTGCAAAGGCAGTAGGAGACTGGTACTATGACCGGAGTCCATTCCAGAAGATAGATTGTGCCTACCCTTGTGACTCTACTTGCCATAACCGGGTTTTTGATCCTCACGAACACCCAGAATTATAG 1200 0.4625 MAKARTGHWLSILAFSLILLKTEGFYVGITYVDSAVAKGAVCLDGSPPAYHMDKGFGAGINNWLVHIEGGGWCNNASTCLARRDNRLGSSKQMVKQIAFSGILSNKQKFNPDFYNWNKIKVRYCDGASFTGDVEAVDPKTNLHYRGARVFLAVIEDLMAKGMKNAANAVLSGCSAGGLTAILHCDKFRALLPVSTKVKCFADAGYFINAKDVSGAAHIEGFYSEVVATHGSAKNLPPSCTSSLRPGLCFFPQNMAQQIKTPLFIINAAYDSWQIKNILAPGVADPHGTWHYCKLDIKDCSSSQLEAMQDFRVQFLSAIKGLIGSPSKGMFINSCYAHCQTEMQETWLRDDSPVLGKTTIAKAVGDWYYDRSPFQKIDCAYPCDSTCHNRVFDPHEHPEL* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1119 399 PANTHER NOTUM-RELATED 19 388 IPR004963 GO:0016787
Vvi2g1119 399 SUPERFAMILY alpha/beta-Hydrolases 143 272 IPR029058 -
Vvi2g1119 399 Pfam Pectinacetylesterase 21 372 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1119 Vvi-Chr2 17729137 17732999 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1119 5 399 Carbohydrate Esterase AT4G19420 60.930 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1119 K19882 - vvi:100245856 836.639