Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1116 ATGGAAGTTCATCAAGCTGATGTCCATGGAAAATTTGAAGTGAACTTCACCAGCAAAACTGTCATCAAAGCTATCGGCCCTTTGCCTGAGCCCCATATCATTACTCTTTCAAACCTTGACCTCCTCTCGGGTCGTTTCCCTGTTACATACTTTTATTTCTACCATAGACCAGTATTGGATGACTTCAGCTCTATCATTGAGGCTCTTAAGTGCTCATTAGCCAAAATTCTCAACCACTACTATCCCTTTTCTGGTCGAATTGCCGAAAACCCGAATACTAATGAACCCGAAATCATTTGTGACAATAGTGGTGCCCTAGTTGTAGAAGCTCATGCCAATATCCCTCTAAAAGACCTAGACTTCCACAACCTTAACCTATCTTTGCAAGGAAAACTAGTATCCATCAACCCTGAATTTCCTTTCCAAGTCCAAGTAACAAACTACACTTGTGGAGGCATTTCCATAACATTCACCTTCGACCATGCTCTTGGAGACGCGAGCGCCTTCGGTAAGTTTCTCTTCTCATGGTCTGAAATAGCGCTAAGGAGGCCACTTTCCTGCATACCTGATCATCGGAGGAACCTTCACGCGCGCTGCCCTCCTACTTATGATCCATTATTGGACCGTACGTTTGTGAAGTGTACCATGGAAGAGATTGTAAATATACCAACAATGAACACCTTGCTTAAGCGCCTTTATCATGTTGATGCATCAAGCATTAATCATCTGCAAAAACTTGCATGTCTTAATGGGCATAAGAGAACAAAAATTGAGGCTTTCTCAGCTTACTTATGGAAGGTTATGGTCAAGGCCATAGATGAAAAACATGAAAAGTGTAACATGGGATGGTTAGTTGATGGACGGATGAGCATGTGTGGAGGCCAGAACTCCCTGTCGAATTACATAGGAAATGTCCTATCAGTCGCTGTTGGGGAGGCCAGTGTGGTTGAAGTGAAGCAAGGATCTATATTGGATGTCGCCAAGATCGTCCACAAAGTAATCTCCAAGGTAACTAACAAAGCTCATTTCTTGGATTTGATCGACTGGATTGAGTGCCACAGGCCTGGACTGATGCTGTCAAGGACGGTACTAGGTCGCGGTGGACCTACTCTTGTTGTGTCCTCAGGAAGGCGGTTTCCTGTTAGCGAACTGGACTTCGGCTTTGGAACTCCAGTTCTTGGAACTGTCTGCTCCACTATAGAAAGGCTTGGTGTTGGTTACATCAACCAAAGGCAGAGTGCTAGAGGTGATGGCTCTTGGACTGTGTCCGCCATCTTATGGCCGGAACTGGCTGCTGCACTGGAATCAGACTCCATTTTGCAGCCCATGACTGCAACTCATCTTCAACTTTAG 1353 0.4501 MEVHQADVHGKFEVNFTSKTVIKAIGPLPEPHIITLSNLDLLSGRFPVTYFYFYHRPVLDDFSSIIEALKCSLAKILNHYYPFSGRIAENPNTNEPEIICDNSGALVVEAHANIPLKDLDFHNLNLSLQGKLVSINPEFPFQVQVTNYTCGGISITFTFDHALGDASAFGKFLFSWSEIALRRPLSCIPDHRRNLHARCPPTYDPLLDRTFVKCTMEEIVNIPTMNTLLKRLYHVDASSINHLQKLACLNGHKRTKIEAFSAYLWKVMVKAIDEKHEKCNMGWLVDGRMSMCGGQNSLSNYIGNVLSVAVGEASVVEVKQGSILDVAKIVHKVISKVTNKAHFLDLIDWIECHRPGLMLSRTVLGRGGPTLVVSSGRRFPVSELDFGFGTPVLGTVCSTIERLGVGYINQRQSARGDGSWTVSAILWPELAAALESDSILQPMTATHLQL* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1116 450 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 29 401 - -
Vvi2g1116 450 Gene3D - 217 436 IPR023213 -
Vvi2g1116 450 Pfam Transferase family 13 436 - -
Vvi2g1116 450 Gene3D - 11 205 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1116 Vvi-Chr2 17661210 17662562 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1116 13 429 Monolignol Biosynthesis Gene Families AT5G48930 23.853 2.05e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1116 - - vvi:100240760 909.827