Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1113 ATGGCTGGACAGTCCAGAAAATGGATGATCCTTGTGGCAACCATATGGATTCAGGCGTTTACAGGGACGAATTTTGATTTCTCGGCCTACTCGTCGGAGCTGAAGACGGTGTTGGGGGTGTCTCAGGTGCAGTTGAACTATTTGGCGACGGCGTCGGATTTAGGGAAACTGTTTGGGTGGTCTTCTGGGCTGGCTTTGATGTATATGCCATTGTGGGTTGTGATGTTCATGTCTGCTTTCATGGGGTTTTTTGCGTATGGCCTTCAGTGGCTTGTTATCAGGAGTATCATTACCTTGCCATACTTTCTGGTGTTTCTTCTATGTTTATTAGCTGGCTGCAGCATCTGTTGGTTCAACACAGTGTGCTTTGTTCTTTGTACTCAGAATTTCCCTGCAAATCGCCCTCTTGCAATCTCTCTCACCGTCAGCTTCAATGGCGTAAGCGCAGCACTATATGCCCTTGCTGCCGATGCCATTAACCCTTCTTCAGATTCACTGTATCTTCTTCTGAATGCCGTAATTCCTCTTCTCACTTCCATTGTTGCCCTTCCCCCAATCCTCCGCCAACCCTCTTTAGACCCTCTTCCTCCTGATGCCGTTCGCCGCGACTCCCTTATATTCCTCATACTGAATTTCTTGGCTGTCCTCACAGGCGTCTATCTCCTTCTCATTAGCTCAATTTCATCCAATGCAACAACATCTCGTCTCCTCTTTTCTGGGGCCATTTTTCTTCTTGTCCTCCCCATATGTATCCCTGGTGTTGTTTATGCTAAGAACTGGTTTCGGAGAACCGTCAATTCTAGCTTCCGCCTTGATGGCTCTGGCTTCATTCTTGTGGATGCTGATGATCTTGAGCTTCACAAAGAGCTCATCACACGATCAGGCAGTGGCTATGGGAATGGAATTTCTGATATTATCAAGAGCAATGGATCTACTCATGAAATTGTTCGATACAATAGCGTAGAACGTGAAAGTTGTTGTGAGAAATTGATGGGAAAAGATCAGTTGGTAATGCTTGGAGAAGAACATCGAGCTCGTATGCTTGTTCGTAGGTTGGATTTTTGGCTATACTACATTGCTTACTTCTGCGGGGGAACGATAGGGCTGGTGTATAGTAACAACCTAGGGCAGATTGCACAGTCTCTTGGCAATAGCTCTGACACTTCAGCTCTAATCACTATCTATTCTGCCTTCTCCTACTTTGGCCGCTTGCTTTCTGCCGCTCCTGATTACATGCGTGCGAAGGTCTACTTTGCAAGAACCGGGTGGCTTAGTATAGCGCTTCTGCCAACCCCAGTTGCCTTCTTCTTGCTTGCGGCATCAGGCAGCAGCGGCAGCATCTTGCACGCAAGCACCGCACTGGTAGGGCTAAGCTCAGGGTTCATATTTGCCGCGGCTGTTTCAATAACATCAGAGCTGTTTGGACCCAATAGCGTGGGAGTCAACCACAACATTCTCATCACCAACATACCAATAGGCTCCCTTGTGTATGGCATGCTTGCTGCAATAATCTATGATGCCAACATAGGCTCCAGCTTAAGAATGGTTACTGATACAGCAGTGTGTATGGGTACGAGATGTTATTTCTTGACGTTTGTCTTGTGGGGAAGCCTCTCAGTTATAGGGCTAGTGTGCAGTGTGCTTCTATTCTTGAGAACTAGACATGCATATGATCGGTTTGAACACAATCGGATTTCATCGCAACTGTATTAA 1713 0.467 MAGQSRKWMILVATIWIQAFTGTNFDFSAYSSELKTVLGVSQVQLNYLATASDLGKLFGWSSGLALMYMPLWVVMFMSAFMGFFAYGLQWLVIRSIITLPYFLVFLLCLLAGCSICWFNTVCFVLCTQNFPANRPLAISLTVSFNGVSAALYALAADAINPSSDSLYLLLNAVIPLLTSIVALPPILRQPSLDPLPPDAVRRDSLIFLILNFLAVLTGVYLLLISSISSNATTSRLLFSGAIFLLVLPICIPGVVYAKNWFRRTVNSSFRLDGSGFILVDADDLELHKELITRSGSGYGNGISDIIKSNGSTHEIVRYNSVERESCCEKLMGKDQLVMLGEEHRARMLVRRLDFWLYYIAYFCGGTIGLVYSNNLGQIAQSLGNSSDTSALITIYSAFSYFGRLLSAAPDYMRAKVYFARTGWLSIALLPTPVAFFLLAASGSSGSILHASTALVGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGMLAAIIYDANIGSSLRMVTDTAVCMGTRCYFLTFVLWGSLSVIGLVCSVLLFLRTRHAYDRFEHNRISSQLY* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1113 570 Gene3D MFS general substrate transporter like domains 345 560 IPR036259 -
Vvi2g1113 570 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 558 - -
Vvi2g1113 570 SUPERFAMILY MFS general substrate transporter 6 555 IPR036259 -
Vvi2g1113 570 Pfam Nodulin-like 7 252 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1113 Vvi-Chr2 17609869 17614788 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1113 1 566 Nodulin-like Gene Family AT1G31470 59.683 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1113 - - vvi:100263024 1093.57