Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1048 ATGGCCATGGACGAAAATAATTTGGTTCATCGATCATTCTTCTTAGGCCCCAAGGAGATAAGAGCACTTAGGAACCGACTTCCTACAAGCCTCGATGCTTGCTCGACGTTTGAGGTTCTAATAGCATATGTATGGAGATGCCACACAATTACATTTGCAGTAGACCCTGATGTTGTTCGCATTTCATGCTTTATCAATATACGAGGCAAGCGTGGTTTTGATCTGCCTCCAGGATACAATGGAAATGCTTTTGCGTGTCCAACTTCAATTACTAAGGCTGGAATACTATGTAAAAACCCATTGGAATATGCGATAAGGTTATTAAAGAAAGCCAAGGCAGAAATGAGCCAAGAGTACATGAAATCAGTGGCAGATCTTATGGTCATCAAGGGCCGACCCTCATTTACGCAGCCGGGGAACTATCTTGTTTCAGATATCACACGTGTCGGGTTTGGAGAGGTTGACTTCGGGTGGGGGAAGCCAGTTTATGGTGGGGGTGCTAGGGTTTTATCTATTTTTAGCTTCTGTATGCGGTTCACGAACAGCAAAGGAGAAGAAGGGAATGTTATACCTATATGCCTGCCTCCGCCAATCATGGAAAGATTTGAACAGGAGCTAAAGAGAATGACAGAAGAGTCAAAGCCTGTTAGACTTATTACATCCAAGCTCTAA 672 0.436 MAMDENNLVHRSFFLGPKEIRALRNRLPTSLDACSTFEVLIAYVWRCHTITFAVDPDVVRISCFINIRGKRGFDLPPGYNGNAFACPTSITKAGILCKNPLEYAIRLLKKAKAEMSQEYMKSVADLMVIKGRPSFTQPGNYLVSDITRVGFGEVDFGWGKPVYGGGARVLSIFSFCMRFTNSKGEEGNVIPICLPPPIMERFEQELKRMTEESKPVRLITSKL* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1048 223 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 202 - -
Vvi2g1048 223 Pfam Transferase family 34 207 - -
Vvi2g1048 223 Gene3D - 1 206 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1048 Vvi-Chr2 16198781 16199452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1048 33 206 Monolignol Biosynthesis Gene Families AT5G48930 25.946 1.67e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1048 - K19861 vvi:100249498 457.603