Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1046 ATGGCGTCGTCATCATCTCCTCTAGTATTCTCGGTTAAACGGTGTGATCCAGAGTTTGTTCGGCCTACAAACCCTACCCCACGAGAGTTGAAGCAGCTTTCTGATATAGATGATCAAGAAGGCCTTCGCTTTCAAATTCCTGTGATAATGTTTTACCCGAACAATCCTTTAATGAAAGGAAAAGACCCTGTAAAGGTCATTAGAGAAGCTCTAGGTAAGGCGCTTGTATACTACTACCCATTTGCAGGCAGGCTGATTGAAGGGGATAATAGAAAACTCATGGTGGACTGCACCGGTGAAGGGGTCTTGTTCATTGAAGCCGATGCCGATACCACACTTGAGAATCTTGGTGATGCAATTCAACCAATGTGTCCCTGCTTCGAGGAGCTTCTGTATGATGTCCCTGGCTCCGGGGGAATTCTGGGTTCCCCTGTTGTCTTAATTCAGGTGACCCGATTGAGGTGTGGAGGATTTATATTTGCATTGCGCCTAAACCACACAATGAGTGGTATTCCTGGCTTGGTCCAATTCCTCAACGCCATAAGCGAGATGGCTCAAGGTCTGTCTGTGCCATCTCTGCTACCCATATGGCAAAGAGAGCTGTTAAATGCCCGAAATCCACCACGAATAACCTGTATACATCATGAATACGAGGAGGTAACCAACACCAAGGGCACACTAATGGCCATGGACGAAAATAATTTGGTTCATCGATCATTCTTCTTTGGCCCCAAGGAGATAAGAGCACTTAGGAACCGACTTCCTGCAAGCCTCGGTGCCAGCACGACATTTGAGGTTCTAACAGCATGTGTATGGAGATGCCGCACAATTGCATTTGCAGTAGACCCTGATGAGGTTGTTCGCATTATTTGCTCAATCAGTATGCGAGGCAAGCGCGGTTTCGAACTGCCTCCAGGATACTATGGAAATGCTGTTGTGACTCCAGCTTCAATTACTAAGGCTGGAATGCTATGTAAAAATCCATTGGAATATGCGGTAAGGTTAGTGAAGAAAGCCAAGGCGGAAATGAGTCAGGAGTACGTTAAATCAGTGGCAGATCTTATGGTCATCAAGGGCCGGCCCTCATTTATGCACCCGGGGAACTATATGGTTGCAGATGTCACGCGTGACGGGTCTGGAGAGATCGACTTCGGGTGGGGGAAGCCCGTCTATAGTGGGCTTGCTAGGGCTATATCTATTATTAGCTTCTGTGCGCGGTTCAGGAACAGCAAAGGAGAAGAAGGGAATGTTATACCTATATGCCTGCCTCCGCCAGTCATGGAAAGGTTTGAACAGGAGATAAAGAAAATGACAAAAGAGGAAGAGCCTGTTAGACTTATTACATCCAAGCTCTAA 1356 0.4683 MASSSSPLVFSVKRCDPEFVRPTNPTPRELKQLSDIDDQEGLRFQIPVIMFYPNNPLMKGKDPVKVIREALGKALVYYYPFAGRLIEGDNRKLMVDCTGEGVLFIEADADTTLENLGDAIQPMCPCFEELLYDVPGSGGILGSPVVLIQVTRLRCGGFIFALRLNHTMSGIPGLVQFLNAISEMAQGLSVPSLLPIWQRELLNARNPPRITCIHHEYEEVTNTKGTLMAMDENNLVHRSFFFGPKEIRALRNRLPASLGASTTFEVLTACVWRCRTIAFAVDPDEVVRIICSISMRGKRGFELPPGYYGNAVVTPASITKAGMLCKNPLEYAVRLVKKAKAEMSQEYVKSVADLMVIKGRPSFMHPGNYMVADVTRDGSGEIDFGWGKPVYSGLARAISIISFCARFRNSKGEEGNVIPICLPPPVMERFEQEIKKMTKEEEPVRLITSKL* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1046 451 Gene3D - 11 216 IPR023213 -
Vvi2g1046 451 Pfam Transferase family 12 436 - -
Vvi2g1046 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 431 - -
Vvi2g1046 451 Gene3D - 217 435 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1046 Vvi-Chr2 16140949 16142942 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1046 16 393 Monolignol Biosynthesis Gene Families AT5G48930 30.612 1.05e-48 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1046 K19861 - vvi:100266675 912.524