Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1045 ATGGCATCATCATCGTCTCCTCTAGTATTCTCGGTTAAACGGCGTGCTCCAGAGTTTGTTCGGCCTACAAACCCTACCCCACGAGAGGTGAAGCAGCTTTCTGATTTAGATGATCAAGAAGGCCTTCGCTTTCAAATTCCTGTGATAATGTTTTACCCGAACAATCCTTTAATGAAAGGAAAAGACCCTGCAAAGGTCATTAAAGAAGCTCTAGGCAAGGCGCTTGTTTACTACTACCCATTTGCAGGCAGGCTGATTGAAGGGGATAATAGAAAACTCATGGTGGACTGCACCGGTGAAGGGGTCTTGTTCATTGAAGCCGATGCCGATACCACACTTGAGAATCTTGGTGATGCAATTCAACCAATGTGTCCCTGCTTCGAGGAGCTTCTGTATGATGTCCCTGGCTCTGGGGGAATTCTTGGTTCTCCTCTTATCTTAATTCAGGTGACCCGATTGAGGTGTGGAGGATTTATATTTGCATTGCGCCTAAACCACACAATGAGTGATGGTCCTGGCTTGGTCCAATTCCTCGACGCCATAAGCGAGATGGCTCAAGGTCTGTCTGTGCCATCTCTGCTGCCCATATGGCAAAGAGAGCTGTTAAATGCCCGAAATCCGCCACGAATTACCCGTATACATCATGAATACGAGGAGGTAACCAATACCAAGGGCACACTAATGACCATGGACGAAAATAATTTGGTTCATCGATCATTCTTCTTTGGCCCCAAGGAGATAAGAGCACTTAGGAACCGACTTCCTGCAAGCCTCGGTGCCTGCTCGACGTTTGAGGTTCTAATAGCGTATGTATGGAGATGCCGCACAATTGCATTTGCAGTAGACCCTGATGAAGTTGTTCGCATTTCATGCTTAATCAATATGCGAGGCAAGCGCGGTTTCGATCTGCCTCCAGGATACTACGGAAATGCTTTTGTGTATCCAGCTTCAATTACTAAGGCTGGAATGCTATGTAAAAACCCATTGGAATATGCGATAAGGTTACTGAAGAAAGCCAAGGCGGAAATGAGCCAAGAGTATGTGAAATCAGTGGCAGATCATATGGTCATCAAGGGCCGTCCCTCATTTACGCAGCCGGGGAACTATCTTATTTCAGATGTCACACGTGCCGGGATTGGAGAGATCGACTTCGGGTGGGGGAAGCCAGTCTATGGTGGGGTTGCTAGGGCTTTATCTAATATTAGCTTCTGTATGCGGTTCAGGAACAGCAAAGGAGAAGAAGGGAATGTTATACCTATATGCCTGCCTCCGCCAGTCATGGAAAGGTTTGAACAGGAGCTAAAGAGAATGACAAAAGAGGAAGGGCCTGTTAGACTTATTACATCCATGCTGTAA 1356 0.4661 MASSSSPLVFSVKRRAPEFVRPTNPTPREVKQLSDLDDQEGLRFQIPVIMFYPNNPLMKGKDPAKVIKEALGKALVYYYPFAGRLIEGDNRKLMVDCTGEGVLFIEADADTTLENLGDAIQPMCPCFEELLYDVPGSGGILGSPLILIQVTRLRCGGFIFALRLNHTMSDGPGLVQFLDAISEMAQGLSVPSLLPIWQRELLNARNPPRITRIHHEYEEVTNTKGTLMTMDENNLVHRSFFFGPKEIRALRNRLPASLGACSTFEVLIAYVWRCRTIAFAVDPDEVVRISCLINMRGKRGFDLPPGYYGNAFVYPASITKAGMLCKNPLEYAIRLLKKAKAEMSQEYVKSVADHMVIKGRPSFTQPGNYLISDVTRAGIGEIDFGWGKPVYGGVARALSNISFCMRFRNSKGEEGNVIPICLPPPVMERFEQELKRMTKEEGPVRLITSML* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1045 451 PANTHER ACYL TRANSFERASE 4 10 437 - -
Vvi2g1045 451 Gene3D - 11 216 IPR023213 -
Vvi2g1045 451 Pfam Transferase family 11 435 - -
Vvi2g1045 451 Gene3D - 217 434 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1045 Vvi-Chr2 16079313 16081235 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1045 12 434 Monolignol Biosynthesis Gene Families AT5G48930 30.068 8.06e-51 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1045 K19861 - vvi:100252759 907.516