Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g1005 ATGGCCATTATTGATGTAAATCTAGAGAAGTTGGGTAAGGTTCTGGATGTGTACGAGGCCAGACTGAGCACCACAAAGTGCCTAGCAGAAGATTTCTACAACTTGGTTGATCATCACCATCTTTCTTACACTTACTACTTCATGAAGACGCCATGGGCTTCCCTCATAAACAGTCGTCCCAAAGTGAAGGCATGGTGGGAGGACATATCCTCAAGGCCAGCTTTCAAGAAAGTGGTTAAAGGCATGACTTTGGTGAGAAGTGATCGGTTTCTAAGCAATGTGGCTCTATGTTATGGGGTAATATTAATTGTAGTGCTTGTTGCCTCTTAA 330 0.4333 MAIIDVNLEKLGKVLDVYEARLSTTKCLAEDFYNLVDHHHLSYTYYFMKTPWASLINSRPKVKAWWEDISSRPAFKKVVKGMTLVRSDRFLSNVALCYGVILIVVLVAS* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g1005 109 Gene3D - 1 83 - -
Vvi2g1005 109 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 80 - -
Vvi2g1005 109 Pfam Glutathione S-transferase, C-terminal domain 5 73 IPR004046 -
Vvi2g1005 109 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 91 IPR010987 -
Vvi2g1005 109 SUPERFAMILY GST C-terminal domain-like 3 83 IPR036282 -
Vvi2g1005 109 FunFam Glutathione S-transferase F2 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g1005 Vvi-Chr2 15027967 15028609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g1005 2 87 Glutathione S-transferase Gene Family AT3G62760 63.953 1.99e-34 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g1005 K00799 - vvi:100242506 156.762