Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0997 ATGCTTAGCCTCTTACATCACCCAAACCTTGTTAACTTGATTGGTTATTGCGCTGATGGGGACCAACGTCTGCTTGTCTATGAGTTTATGCCATTGGGATCTTTGGAGGATCATTTACATGGTTAG 126 0.4286 MLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHG* 42
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0997 41 PANTHER OS07G0668900 PROTEIN 1 40 - -
Vvi2g0997 41 Pfam Protein tyrosine and serine/threonine kinase 1 40 IPR001245 GO:0004672|GO:0006468
Vvi2g0997 41 Gene3D Transferase(Phosphotransferase) domain 1 1 41 - -
Vvi2g0997 41 SUPERFAMILY Protein kinase-like (PK-like) 1 40 IPR011009 -
Vvi2g0997 41 ProSiteProfiles Protein kinase domain profile. 1 41 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi2g0997 41 FunFam - 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0997 Vvi-Chr2 14486531 14486656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0997 1 39 Glycoside Hydrolase AT3G07070 87.179 1.20e-19 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Vvi2g0997 PK_Tyr_Ser-Thr 7.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0997 - K13430 nta:107764715 90.5077