Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0993 ATGAAGAATGGTGTCAAATTAGAGAAGATTGTGAGATTTGAAGCGGCCCCGGCACCTGTGGAGGCTGGAACTGAAGCAGAAAGTGCTTTGTTGCATGATAAGGAGAATGGGAAATTCGATCAAGAACCTGGAGTTACCGAGCCCATAAAATTTGGTTCTCATGGAGATGAGCCTGTCAAAGGGAAGGGTCCAGTTCTAGGAGCATTTGGTAATGCAAAGACTGTCAGAAACAATAATTCAAGTCGGTTTGGTAAGTTTGTGGAGATTCAATTTGATCAGAGGGGAATGATTTCAAGAGCAGATATCAGGACCTATTTGCTGGAAACAAAGCTATGTTTGCTTGAAGGGGGTCGCTCAGCTTTCTCACTGGAGCCCTTCGCTCATGTGCCTACTCCTATTCATAAGTGGAATCTTCATAATTTGCCCAAAAACACTCAACTCTGGATCAACCGTGATGACCTTTCTGAAATGCAAGTGAGTGATAACGAAGTCAGAAAATTGGAATTCTTGTGGCAGCACTTGTGGAAGGAAATTCAGACATACCTGGGGAAGCTTCAGAGTGCAACATTGATATATAAGATATATGTAGCATGCTGGATGGGTGAGGAAGTTTTGTCGCCTGCTGCTGCAGCTTCAGTACTGAGATTCATGGGATGCTCATGTAGCGGTGATCTGATTGGAATGAGTGTTAAGCATGCTGCTTCAGGAATCCATGGTCCCATCAATGGGAAGAAAACGCTGGCAGAAGCAAATGCACTCCGTCCAGCCGAGAGCATTGTGCGTCATGCCCTTACCATTCGGAATGATGCCACTGAAGACGAGATTTGTCTTCACAGCCTTGGTATTATCTTTGTCTTCATTCTCGTGCACAGTTTGATTCGCAAGGAGAAAGATGCGGGAAATGCCAATTGTGCATTGCGAGCTCTTAGCCAGAAGCTGAGCAGAGGTTTTTATGAGGCTCTCAATGGGTTTACTGATGAAGGGTGGTCAATGATGGGAAATGACACGTCTGAGCTGACTGAAAAGAATTTATGGAGGAAGTTTGATGCTGGACTGTTCATGACGGAGAACCTGACCACCTTACACTCAAGAAGTGACGCATTTGATAACCTTGCCAGATCTTCAGAAAGTGGCAGTAGTGGTAATGAAAATATTGCTTCATATACAAAAAGTGACTTGCATTTCTGTTCAGAAGGTGTCGTTGCAGAGCCAAAGAGCATGCTGATGGTTTCGGAGTTCATTGGGCGTTCTCCATCACTAAGTGGGGCAATTCGAGTTAACCCATGGAACATTGATGCTGAAGCTGAAACTATGGAGTATGCCTTAACTGTCCCTGAGCCAGAGAAACTAGGTTTTGCTGAAAGCTCTCCGGTAACCTAG 1380 0.4478 MKNGVKLEKIVRFEAAPAPVEAGTEAESALLHDKENGKFDQEPGVTEPIKFGSHGDEPVKGKGPVLGAFGNAKTVRNNNSSRFGKFVEIQFDQRGMISRADIRTYLLETKLCLLEGGRSAFSLEPFAHVPTPIHKWNLHNLPKNTQLWINRDDLSEMQVSDNEVRKLEFLWQHLWKEIQTYLGKLQSATLIYKIYVACWMGEEVLSPAAAASVLRFMGCSCSGDLIGMSVKHAASGIHGPINGKKTLAEANALRPAESIVRHALTIRNDATEDEICLHSLGIIFVFILVHSLIRKEKDAGNANCALRALSQKLSRGFYEALNGFTDEGWSMMGNDTSELTEKNLWRKFDAGLFMTENLTTLHSRSDAFDNLARSSESGSSGNENIASYTKSDLHFCSEGVVAEPKSMLMVSEFIGRSPSLSGAIRVNPWNIDAEAETMEYALTVPEPEKLGFAESSPVT* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0993 459 Pfam Myosin head (motor domain) 63 109 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi2g0993 459 ProSiteProfiles Myosin motor domain profile. 1 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi2g0993 459 Gene3D Kinesin motor domain 53 115 IPR036961 -
Vvi2g0993 459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 109 IPR027417 -
Vvi2g0993 459 PANTHER MYOSIN 63 109 - -
Vvi2g0993 459 SMART MYSc_2a 2 410 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi2g0993 459 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 398 449 - -
Vvi2g0993 459 Gene3D Glycogen Phosphorylase B; 386 454 - -
Vvi2g0993 459 Pfam Glycosyltransferase family 20 404 449 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0993 Vvi-Chr2 14367386 14371353 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0993 52 162 Myosins gene family AT4G28710 48.696 1.05e-19 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0993 K10357 - vvi:100267528 104.76