Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0976 ATGGAGAGAGGATACGAGAACGGAGTGGTAATGACGCGAGACCCGAGGCCGCGCTTGCGCTGGACGCCCGATCTCCACGACCGCTTTGTCGACGCTGTCACCAAGCTCGGCGGTCCACACAAAGCAACACCCAAGTCGGTGTTGAGGCTGATGGGCTTGAAGGGCTTGACACTGTACCATTTGAAGAGCCATTTACAGAAATATAGACTTGGACAGCAATCCCGGAAGCAAAGCATCACAGAGAACAGTGATTACAGGACTCATGCCTCAGGAACGAGTGCTAAATCATCAAGCAGAAACAACGAACAAGGAGGGATCCTAATTGCAGAGGCAGTAAGGTGTCAAGTTGAAGTACAAAAACAATTACTAGAGCAGATTGAGGTACAGAAGAAGTTACAAATGAGAATAGAGGCTCAAGGAAAATACTTGCAGGCAGTACTGGACAAAGCACAACAAAGCCTCTCAATAAATGTGAACTGCCCTGGTAGTCTAGAAGCCATGAGAGCCCAATTAACCAACTTTAATATGGCTCTGTCAAGTCTTACGGAGAACACAAATGAAGAAGACATGAAGGTAAACATAATAGAGAAGAGCATACCAAGTAATAGGGCCAATGGTTCTGTTTTCACAGCTTACCGAGAGGCAGAGGAATTAGTAAACAAGGATGTCAAGTTCAGGGAGGGAGAAGGTTTTAGACATTTTGATTTGAATACCAAGGGTAACTATGAATTTGCTGGTGCAAATGGAGCTGATTTTGAAGCCAAGATGATTGCATACAGAAGATGA 786 0.4517 MERGYENGVVMTRDPRPRLRWTPDLHDRFVDAVTKLGGPHKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQSRKQSITENSDYRTHASGTSAKSSSRNNEQGGILIAEAVRCQVEVQKQLLEQIEVQKKLQMRIEAQGKYLQAVLDKAQQSLSINVNCPGSLEAMRAQLTNFNMALSSLTENTNEEDMKVNIIEKSIPSNRANGSVFTAYREAEELVNKDVKFREGEGFRHFDLNTKGNYEFAGANGADFEAKMIAYRR* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0976 261 Pfam Myb-like DNA-binding domain 19 69 IPR001005 -
Vvi2g0976 261 Pfam MYB-CC type transfactor, LHEQLE motif 108 152 IPR025756 -
Vvi2g0976 261 NCBIfam myb-like DNA-binding domain, SHAQKYF class 17 71 IPR006447 GO:0003677
Vvi2g0976 261 Coils Coil 164 184 - -
Vvi2g0976 261 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 7 195 IPR044848 GO:0003700
Vvi2g0976 261 SUPERFAMILY Homeodomain-like 16 73 IPR009057 -
Vvi2g0976 261 Gene3D - 15 73 - -
Vvi2g0976 261 FunFam Myb family transcription factor 15 73 - -
Vvi2g0976 261 MobiDBLite consensus disorder prediction 70 101 - -
Vvi2g0976 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 73 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0976 Vvi-Chr2 14033145 14036544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0976 9 186 G2-like Transcription Factor Family AT3G24120 50.794 3.69e-57 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vvi2g0976 Myb_DNA-binding 8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0976 - - vvi:100253346 518.079