Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0965 ATGGATCTGTCTGGAACACACTACTTTAACCAGTGTTACATCCAAGGAAGCATTGACTTTATCTTTGATGGGGCAAGATCAATCTATCAGAATTTGGTGGCAGGAAAGGGTTTGTTCACTTCAGATGAGGCGCTCTTCAGTGACCCTTCATCTCAGCCTATAGTCACTGATTTTGCCAACAACCCAGGTGAGTTCAATGGAGCTTTCATCACCGTAATGAGGAGGCTTGGGAGAGTTTGCGTCAAAACTGGTGACCAAGGAGAGATTAGGAAGGATTGCACAACCTTTAATTCATGA 297 0.4411 MDLSGTHYFNQCYIQGSIDFIFDGARSIYQNLVAGKGLFTSDEALFSDPSSQPIVTDFANNPGEFNGAFITVMRRLGRVCVKTGDQGEIRKDCTTFNS* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0965 98 Gene3D Peroxidase, domain 2 26 76 - -
Vvi2g0965 98 PRINTS Plant peroxidase signature 31 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi2g0965 98 PRINTS Plant peroxidase signature 71 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi2g0965 98 PANTHER - 27 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi2g0965 98 SUPERFAMILY Heme-dependent peroxidases 26 97 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi2g0965 98 ProSiteProfiles Plant heme peroxidase family profile. 27 97 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi2g0965 98 Gene3D - 77 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0965 Vvi-Chr2 13761206 13761908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0965 27 97 Peroxidase AT5G14130 67.606 8.71e-26 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0965 K00430 - vvi:100249751 133.265